| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1197 |
|---|
| Symbol | |
|---|
| ID | 6331853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1246427 |
|---|
| End bp | 1247530 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642657481 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001931362 |
|---|
| Protein GI | 188997111 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.788986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA ATAATATAAA AATTCTATGG ATTAATGCAA ATCCAAATCC AAATCCCGGT
GGAACAGAGC AGCATTCTAT TGACTTTATT AATGCATTAG AAAAGATAGA CAATCTTACA
ATCTATAAAG CGGTTGCAAA AGGAAGCTTT GTAGACAAAA ATACATCAGA TAAAAATAAA
TTCTACATAA CTTTAAAGTC TGAATTTTCA CCAATAAACA CGATAAAACT AATAAGATTA
GCAAAAAAAT TAAAGCCTGA CTTTGTGATT GGAAACAACG GCAATGAATA TATAAACACT
TTTTTAGCCG GAAAACTCTC CGGAAGTAAA ATTATCCTTT TTAGACATAT GCTAAACTAT
CAGCCGTTTT TCATAAAAAA GTTTATACTT CCAAAGGTAG ATAAGATTTT TGCAGTCAGT
CATGCAAGTA AATTAAGACT TATGAAAGAT GGAATAGCAG AAAATAAAAT CACGGTTTTA
TACAACTTTA TTGACGAAGA AAAGTTTTAC TACTCGGAAT TTGAAAAACA GCAAGTTAGA
CAGCAGCTAA TGATAAGTCC AAATGAAAAA GTTATAACAT TTATTGGAAA GGTCGCTGAG
GGTAAAGGTA TTTTTGACTT TATAGAAGTG TCTAAGCTTC TTGCCAAAAA GTATGATAAT
TTAAAATTTT TGATAATTGG AGATGGAAAA GAGCTTCCAA TAGCAAAAGA GATGATAAAA
GAGTATGGAC TGTCCGATAA ATACATAATA ACAGGATATA CAAACAAACC TGAGTATTTT
TTAAAAGCTT CTGATTTTGT ACTTGTATTA TCAAAAGGAG AAGAAAGCTT TGGAAGGACT
GTTGTAGAAG GCTTTGCAGT CAAGAGCTTG GTCGTCGTTT ATGATGTAGA AAATTTAAAA
TATTTAGTGG AAGATTTTAA AACTGGTTTG GTAGCAGAAA TAGGAAATTA TAAACAAGTA
TTTGATAAAT TAGACAAAGT TTTATCAGAT GAGAATTTGT ATAAAACAAT TGTTGAAAAT
GGTTATAACG AGTTTAAAAA CAAATACACA AAAAAGATAA TTTTAGAAAA ATTTTTAAAG
GAGTTACAAA ATTTTAGCAG TTAA
|
|---|
| Protein sequence | MENNNIKILW INANPNPNPG GTEQHSIDFI NALEKIDNLT IYKAVAKGSF VDKNTSDKNK
FYITLKSEFS PINTIKLIRL AKKLKPDFVI GNNGNEYINT FLAGKLSGSK IILFRHMLNY
QPFFIKKFIL PKVDKIFAVS HASKLRLMKD GIAENKITVL YNFIDEEKFY YSEFEKQQVR
QQLMISPNEK VITFIGKVAE GKGIFDFIEV SKLLAKKYDN LKFLIIGDGK ELPIAKEMIK
EYGLSDKYII TGYTNKPEYF LKASDFVLVL SKGEESFGRT VVEGFAVKSL VVVYDVENLK
YLVEDFKTGL VAEIGNYKQV FDKLDKVLSD ENLYKTIVEN GYNEFKNKYT KKIILEKFLK
ELQNFSS
|
|---|
| |