| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1189 |
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| Symbol | |
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| ID | 6332640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1240155 |
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| End bp | 1241048 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657473 |
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| Product | integrase family protein |
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| Protein accession | YP_001931354 |
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| Protein GI | 188997103 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000203109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCT CTGAATGTTG TAATTTATTT TTATCTTACA TGGCAGACAA ATCGCCAAAT
ACTGTAAAAA ATTACAGAGT TGATTTTAAT CAATTTATTA AAATAGTTGG AGATAAAAAT
ATAAATGAAA TCACAAAAGC AGATATTGCT AAATTTAGAA TGACTTTACA GATGCAAAAT
AGAAAATCTT CAACCATAGC AAGAAAACTT GCTTCTATTA ATTCATTATT TCAATATTTA
ATGGATCTAG AATTGGTTAG CTCTTCGCCT ATAACCAAAT CCCACAGACC AAAAGTTTCT
CAAAAAATTC CGTCTGCTTT GTCAAACGAA GAAGTAAAAA AATTAATAGA TGCTTTAGAC
AGTATCCAAG ATAAGGCTAT CGTAGTTTTA TTTTTGACCA CAGGTTTAAG GTCTTCTGAA
CTTTTAAGCA TTAAAAAATC TAATATTATC GTTGAAAGAA ACGGTCAAAC ATTTTCTATT
GACAGACTAA TAGAAGGTGA AGTCAAAGAG GGAGATATTG CATACATAAG AGTGGTCGGT
AAAGGAGATA AGGAAAGGGA AGTTCCTATA ACCGGCAAAC CTTTAGAAAT TTTAGTCCAA
TATTTAAAAA GTATCAATGA GTTTTTAGAT GATAATGAAT ATATTTTCCC GATTTCTTAC
CATCTTCTTT GGAGAAAGAT TAAAAATATA GGTAAAAAAT TGGCTATTAC ATTACATCCA
CACAAGCTAA GGCATACAGC TGCAACAATG GCATTATCTT CCGGAGCAGA ACTTAGAGTT
ATACAAGAAC TTTTAGGTCA TGCTTCACCT GTAACAACTG CAAGATACGC AAAAGTTGGT
CAAAAGCAGC TTTTAAAAGC AACTAAAGCC TTATCAGAAA ATATAGATTT GTGA
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| Protein sequence | MKVSECCNLF LSYMADKSPN TVKNYRVDFN QFIKIVGDKN INEITKADIA KFRMTLQMQN
RKSSTIARKL ASINSLFQYL MDLELVSSSP ITKSHRPKVS QKIPSALSNE EVKKLIDALD
SIQDKAIVVL FLTTGLRSSE LLSIKKSNII VERNGQTFSI DRLIEGEVKE GDIAYIRVVG
KGDKEREVPI TGKPLEILVQ YLKSINEFLD DNEYIFPISY HLLWRKIKNI GKKLAITLHP
HKLRHTAATM ALSSGAELRV IQELLGHASP VTTARYAKVG QKQLLKATKA LSENIDL
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