| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1180 |
|---|
| Symbol | |
|---|
| ID | 6332135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1228643 |
|---|
| End bp | 1229524 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642657462 |
|---|
| Product | Polysulphide reductase NrfD |
|---|
| Protein accession | YP_001931346 |
|---|
| Protein GI | 188997095 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGAG CAGAAGTAAC TTTTGATGTT GCATTACCAA AGGTTGTTTG GGGATGGCTT
GTTTCAACCA ATATGTGGGC TAAAAGTATA GCAACAGGCT CTTTTTTAGT AGGATTATAC
TTCATTAGAA AATATCCAGA AAAAGATGCA TTTTTTAGAA AATGGCTACC AATTCTTGGA
TTAATATTCA TAGCGATAAC ACTTTTAGTA ACGGTTTTAG ACTTACACCA CATGTTTAGA
TTCTGGAAAA TCTTTGTATT TGCCCATTTT ACATCAGCAG TTACACTTGG TGCTTGGGTG
GTTTCTGCGT TTGTTATAGT TTTACTTTTA TCTTTCTGGT CATGGATTAC AGGAAACAGA
AAATTGTTTG ATAAAATCGC AATACCGGGA TTTATCCTTG CCTTTTTCTC AACTATTTAC
ACAGCCGGAA TTATGGGAGA AGCAACAGCA AGAGAGCTTT GGGTATTTCC TGTAGAGTTG
TTCCAAATGC TATTATCTGC TGTTTTAGCC GGCTCTGCAG CTTATCTACT CCTTATGCAA
ATATTCAACG TCCAAATGGA AGATATTAAG AGAGAATTAA GCTTTATTTT TATAGGCTCA
GCGTTTTTAT CTTCGGCAGG ATATATTGGA GAGCTTTTAT TTGCAAGAAT GCACTCAGAA
TTTTCTCATA GAGCGGTTGA GATTTTAGCT TTTGGTGAAC TTGCTCCTAT GTTCTGGCTT
GGAATGTTCC TTACGTTTAT CATTCCAATA ATATTAGTAG GAGTAGCTAC AGAAAAGAGA
AAGTATGAGT ACCTAACCTT AGGCTCAATT TTAGCTTTGA TAGGACTTTG GCTTATAAAG
CATAGCTGGC TTTTAGCTCC TCAAATGCTT CCTTTAAGCT AA
|
|---|
| Protein sequence | MLGAEVTFDV ALPKVVWGWL VSTNMWAKSI ATGSFLVGLY FIRKYPEKDA FFRKWLPILG
LIFIAITLLV TVLDLHHMFR FWKIFVFAHF TSAVTLGAWV VSAFVIVLLL SFWSWITGNR
KLFDKIAIPG FILAFFSTIY TAGIMGEATA RELWVFPVEL FQMLLSAVLA GSAAYLLLMQ
IFNVQMEDIK RELSFIFIGS AFLSSAGYIG ELLFARMHSE FSHRAVEILA FGELAPMFWL
GMFLTFIIPI ILVGVATEKR KYEYLTLGSI LALIGLWLIK HSWLLAPQML PLS
|
|---|
| |