| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1163 |
|---|
| Symbol | |
|---|
| ID | 6331837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1209914 |
|---|
| End bp | 1211335 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642657445 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001931329 |
|---|
| Protein GI | 188997078 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000197587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA TTGTAATTGC AGGAAGTGGA TTTGCAGGAC ACTATGCAGC ACTGATTTTA
GCAGACAGAC TAAAGGGTAA TCACGAAATA ACAGTGGTTA CACCTAACGA AACATTCAAT
TACATTCCAT CTCTAATTTG GGTTGGTGTT GGCCAAATGC CAGTTGAGAA AACACAATTT
CCATTAAAGC CAGTTTACGA CAAATTTGGA ATTAAGTATG AAAGAGCATT TCTAACAGAA
GTTCATCCAG ATGATAACTA TGTTATGATA AAGCCAGTTG GCTCTGAGCA AGAAAAAAAA
TTAAATTACG ATTATCTTCT TGTTGCAACA GGTCCTAAGC TAAACTTTGA TGCTACTCCA
GGACTTGGTC CAGAAAAAGG CTATACATAT TCTGTTTGTA CACCTCCTCA CGCTGTAGAA
ACTGCTAAAG CTTATTTAGA ACTTGTAAAA AGATTAGAAA AAGGTGATAA AGCTAAAATC
GTTATCGGAA CAGGGCATGG CGGTTGTACT TGTCAGGGTG CAGGATTTGA GTTTATCACT
AACGTTCATA ATGACCTTGT TGATAGAGGA TTAAGAGATA AAGTTGAACT AACATGGCTT
TCTAATGAAC CAAAGCTTGG AGACTTTGGA ATTGACGGAC TTGAAGCTAA AAAGGGTTCA
TTGATCTTTA CTTCAGAAAT GATGGCAGAA GGTATATTCT ACGATTATGG AATCAAATAC
GAAATCAGAA GTCACGTTCA TAAAGTTGAT GAAAAGAAAA TATACATTGA AAACTTAGAC
GGAGAGTTTA AAGAATTAGA ATATGACTTT GCAATGCTCC TTCCACCATT TGCAGGACAG
CCAATTAAAT GGATAGATAA AGATGGTAAT GATATAAAAG ATAAGATGTG TAACCCGGCA
GGATTTGTAA AAGTTGATGC TGTGTACGGA AAACCTTACG AAGAATTAGA TGGTCCGGAT
TGGCCTAAAA CATATCAAAA TCCTATCTAT AAAAACATTT TTGCAGCCGG TATTGCTTTC
GCACCACCTG GACCTTTATC AAAACCAGGT AAATCCCCAA ATGGAACAAT AATAGCACCG
GCTCCACCAA GAACAGGTTA TACTGCGGAG TTATCCGGAA AAGCAGCAGC GTTAAACATT
GTTGATATGA TTGAAGGAAG AGAACCTCAA AATACAGCTT CAATGGCAGA AACACCGGGA
TTATGCGTTG CCTCTATGAA AAATGGAATC TTTGATGGCA TGGCAGGAAC GATTGCAATC
TTTCCAGTTG CAAGAAATAG AGCTAAATAC GGCGAATACG GTAGAGATTT AGATTTATGT
GTTGCAGAAC CAGGAAAAGC TGGAGCATGG TTTAAACTTG GCTTACATTA TGCATTTTTA
TGGAAATTGC AAGGTAAGGC TTTCTGGAAA TTAATACCTT AA
|
|---|
| Protein sequence | MAKIVIAGSG FAGHYAALIL ADRLKGNHEI TVVTPNETFN YIPSLIWVGV GQMPVEKTQF
PLKPVYDKFG IKYERAFLTE VHPDDNYVMI KPVGSEQEKK LNYDYLLVAT GPKLNFDATP
GLGPEKGYTY SVCTPPHAVE TAKAYLELVK RLEKGDKAKI VIGTGHGGCT CQGAGFEFIT
NVHNDLVDRG LRDKVELTWL SNEPKLGDFG IDGLEAKKGS LIFTSEMMAE GIFYDYGIKY
EIRSHVHKVD EKKIYIENLD GEFKELEYDF AMLLPPFAGQ PIKWIDKDGN DIKDKMCNPA
GFVKVDAVYG KPYEELDGPD WPKTYQNPIY KNIFAAGIAF APPGPLSKPG KSPNGTIIAP
APPRTGYTAE LSGKAAALNI VDMIEGREPQ NTASMAETPG LCVASMKNGI FDGMAGTIAI
FPVARNRAKY GEYGRDLDLC VAEPGKAGAW FKLGLHYAFL WKLQGKAFWK LIP
|
|---|
| |