| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1124 |
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| Symbol | |
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| ID | 6331101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1172771 |
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| End bp | 1173808 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642657408 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001931293 |
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| Protein GI | 188997042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.745547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATT TATTGAACGA TTATAAAGAG CTGATATTAT TCGTTGGCTC TTTTGTTGTT
TTATACATTT TAAGGCTTAC AGCTTTAAGA TTTTTAAAGG CATTTAGAAA TAGATTTGAA
GGTCTATCGT ATAATATTTT AAATACTATC TATAAAAGCA TAAAAATTCC ATCCTTAATT
TGGGTAATTT TACTTTCTGC ACATGCAACG GTCTATCTCT CAAGATTGCC CCAAAATCAG
ATAAATCTAA TAACAAAAGT AATAGACGTG TTATTGATAT TCTCAATTAC AATACTGATT
GCGAACCTTT CCACAAGAAT CGTTAAACTT TATTTACAAA ATAAAAATCT TCCAGAGACA
GGGCTAATAT TTATCCTACT TCAAGTTTTT ATCTATTTGA TTGGAATATT AATGATGCTG
TCTTATTTTG GTATCTCTAT AATGCCAATT ATTACAACGC TTGGAATAGG TGGTCTTGCA
ATAGGTTTAG CTCTAAAAGA TACACTATCA AACATTTTTT CAGGTCTTTA TATACTGCTT
GAGAAAAATA TAAAGGTTGG TGATTTTATA GAGCTTGAAA ATGGTAAAAA AGGTTATGTT
ATGAACATTA ACTGGCGAAC TACAACAATA AAAACTTTAT CTAACGATGT TGTAATCCTT
CCTAACGAAA AGCTTGCTCA AAGCATCATT GTTAATTTTG CAAAGCCTGT AGAACTTACA
AGAGTAGCTA TAGAGATTCC TGTTAGTTAT TATACAGATA TAGAAAAGTT TGAAAAAATA
GTAATGGAAG AAGTTTATAA CTTAGCAAAA GAAAATGATA AATTGTTACT TGACCCTGTT
CCAGTACTTA GATTTATTCC TGGCTTTAAA GATAGTTCTT TAAACTTTAC GCTTTATTTT
TATGCAGCAA ATTATGAAGA TAGTTTTTTA GTTCAAAGCG AGCTTAGAAA GAGAATATTT
AAAAGATTAA AAAAGGAAGG TATAGAAATT CCATATCCAC AATTAGACGT GCATATTAAA
GAGTTCCCCT CTGTATAG
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| Protein sequence | MNNLLNDYKE LILFVGSFVV LYILRLTALR FLKAFRNRFE GLSYNILNTI YKSIKIPSLI
WVILLSAHAT VYLSRLPQNQ INLITKVIDV LLIFSITILI ANLSTRIVKL YLQNKNLPET
GLIFILLQVF IYLIGILMML SYFGISIMPI ITTLGIGGLA IGLALKDTLS NIFSGLYILL
EKNIKVGDFI ELENGKKGYV MNINWRTTTI KTLSNDVVIL PNEKLAQSII VNFAKPVELT
RVAIEIPVSY YTDIEKFEKI VMEEVYNLAK ENDKLLLDPV PVLRFIPGFK DSSLNFTLYF
YAANYEDSFL VQSELRKRIF KRLKKEGIEI PYPQLDVHIK EFPSV
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