| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1122 |
|---|
| Symbol | |
|---|
| ID | 6331099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1169988 |
|---|
| End bp | 1171223 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642657406 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_001931291 |
|---|
| Protein GI | 188997040 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0253386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA AAGAATACTT TGAAAAAATA TTAGACAGAT CTACCGAAGA ATTAGTAAAA
GAACTTTTCC CAAACGGTAT AACAACCAAA GAAAAGATAG GTATAAGAAA GCTTTTAGAA
TCTGTTGTAG AACTGGTCAT GAATCAGGAA AGAAATTTCT TCCTTGAAAA TGATGAAGAT
AACAAAGCAA ATGGGTATTA TGAAAGAAGC CTAAATACTG GTTCTTTCAA GCTTAACATA
AATGTCCCAA GAGATAGAAA GGGTAAATTT AGACCACAAA TATTACCTGA CCCTTATAAA
AGAGTTAATG AAGATTATAT AGACCTTCTT ATGAGTTTGG TATCCAATGG ATACTCAGAA
AGCAAGATAG ATTCTACATT AAAAAGCTTG GGCTTAAACT ACTCAAAACA ACATATGGAT
AAAATCAAAA AAGAGCTTAT AGAAAGACTT AATGATTTTA AAACAAGAGA GCTTCCATCG
GATGCATTTG TACTGTATAT AGACGCATAT CACTGTGATA TAAAAGAGAA AAACAAAATC
AGAAAGGCTT CTGTCTATGT AGTTCTTGGA ATAGATTTAC AAGGAAATAA AGATATATTT
GGATTTTACA CATTTTTCAG TAGTGAAAAC AAAGCAGACT GGATAAAAGT ATTCAATGAT
TTAATAGATA GAGGACTAAA AAGGGTAATG CTTATAGTAA GTGATGATTT TCCTGGGATA
ACAAAAGCCA TAGAAACACT ATTTCCTTAT ACAGACCATC AGCTATGTTT AGTCCATTTA
CAAAGAAACG TTAGAAATCA GATGGATAAA GAAGATTCAC AAGTATTTAA CAAAGAATTA
AAAAACATAA AAGAAAACAG CTTAGATTAT GAAGATGGAT TAGAAAAATT AGATGATTTA
TGTAGTAGAT TTAAATCTAA ATATCCAAGC TTTATAAAAC ATATTCAATC TAACAAAGAG
AGATACTTAT GTTTTTTAAA ATATCCAGAA AATCTAAGAA AGCACATATA CACAACAAAT
CCAGTTGAAA GTGTTAATAG CATGATAGAG AAAGTAAGAA TAAATTTAGG CGGATATTTT
CAATCTGTAG ACATTCTTGA GATAAATCTG CTTATACAGA GAGATAATTT AAAGAATGGA
AAATGGAAAA AACCTATACC TGCTTTTAAA GGAGCTTCTT ATGAAATTTT ACAATTGTTT
AATAAAAAGT TTTCAATCCA GACACAAAAT TATTGA
|
|---|
| Protein sequence | MDKKEYFEKI LDRSTEELVK ELFPNGITTK EKIGIRKLLE SVVELVMNQE RNFFLENDED
NKANGYYERS LNTGSFKLNI NVPRDRKGKF RPQILPDPYK RVNEDYIDLL MSLVSNGYSE
SKIDSTLKSL GLNYSKQHMD KIKKELIERL NDFKTRELPS DAFVLYIDAY HCDIKEKNKI
RKASVYVVLG IDLQGNKDIF GFYTFFSSEN KADWIKVFND LIDRGLKRVM LIVSDDFPGI
TKAIETLFPY TDHQLCLVHL QRNVRNQMDK EDSQVFNKEL KNIKENSLDY EDGLEKLDDL
CSRFKSKYPS FIKHIQSNKE RYLCFLKYPE NLRKHIYTTN PVESVNSMIE KVRINLGGYF
QSVDILEINL LIQRDNLKNG KWKKPIPAFK GASYEILQLF NKKFSIQTQN Y
|
|---|
| |