Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1120 |
Symbol | |
ID | 6331097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1167830 |
End bp | 1168816 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657404 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001931289 |
Protein GI | 188997038 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0932183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCT ACAAAATTGT TATAGGAGTT GATGTATCTA AAAACTCATT CACTGCTACA GTTTTGTATG ATAACAAGAA AGAAACTTTT GAAGTTAAAT CTGACCCGGT AGAGTTTGAA ATGAAAGTAA AGCCTTACCT TAAGAAGTTT AAAAAGTCAG ATATGCTTAT CATAATGGAA CATACGGGAG TTTACCATTT AAAGCTTGCT AATTATCTGT ATGAAAATGG TTATAAAGTA GCAGTAGTAA ATCCATTTTC AATAAAGAAA TTTATGGAAG CTAAAATGAC AAGAGTTAAA ACAGATAAAG CTGATTCATT CTTTATTGCA GAATATGGAA GAACGTTTTT CGATGGAGAG CTTTATAAAC CAAAATCAGA TGTAGAAAAA GAAATAGAAG TAAAACTAAA GATATTGGAA GACCTACAAC AGCAGCTTAC AATGCTAAGA AACAAAAGAG AATCATTAAC CTATGTACCA ATGAAAAAAT TGAAAGAGAA TTTAGAATAT TACGATGAGC TAATTAGAAA AATAGAAAAA AACATAAAAG AACTTGAGAA AGAGATAAAA GAATTGTCTA AGAAGAATTA TCAAGAGGAA TACAAACTTT TAAAAAGCAT ACCTGGTATA AGTGATAGGA CTATAGGAAT GATAATATCA GTATATGGAA ATTTTGAAAG ATTTAAGAGT GTAAAAGATG CATCAAGTTT TATAGGAATT AATCCAAGCC CATATGAAAG TGCAGCATGT GTAAAGAAAA GTGTCCGGAT AAAAAAGATG GGAAATCCAT ATGCAAGAAA GATATTATAC ATGGCAGCAT TATCAGCAAT AAGGTTTAAC AAATACTGCA GAGAATTATA CGAAAGATTA GTAAGTAAAG GTAAGGCTAA AAAGTTAGCA TTAGTGGCTG TAGCACATAA GTTATTAAGG CAAGCATATG GTGTATTAAA AAGCAGAAGA CCATTTGATG AAAATTTTTG CACTTGA
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Protein sequence | MNSYKIVIGV DVSKNSFTAT VLYDNKKETF EVKSDPVEFE MKVKPYLKKF KKSDMLIIME HTGVYHLKLA NYLYENGYKV AVVNPFSIKK FMEAKMTRVK TDKADSFFIA EYGRTFFDGE LYKPKSDVEK EIEVKLKILE DLQQQLTMLR NKRESLTYVP MKKLKENLEY YDELIRKIEK NIKELEKEIK ELSKKNYQEE YKLLKSIPGI SDRTIGMIIS VYGNFERFKS VKDASSFIGI NPSPYESAAC VKKSVRIKKM GNPYARKILY MAALSAIRFN KYCRELYERL VSKGKAKKLA LVAVAHKLLR QAYGVLKSRR PFDENFCT
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