| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1111 |
|---|
| Symbol | |
|---|
| ID | 6332669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1155863 |
|---|
| End bp | 1156669 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657395 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001931280 |
|---|
| Protein GI | 188997029 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTTTT TAGATATTTT CACAGTTCCA TTTATGCTTA ATGCGTTTAT TGGTGGTCTA
CTGGTAAGTG TTTTACTTTC TGTTTTGTCA TTTTTTATCT ATGTTAAAAA ATGGTCGTTT
ATAAATGTTG GTATTTCTCA TGCTGCATTT GGTGGGCTTG CAATTGGCTT TTTTGCCGGA
ATCAATCCAA CATTAACAGG TAGTATTTTT GCTGTTTTGG TGGGTGTGTT GATAGGATAC
ATTAGCAAAA AAGGAAAAAT TCATGAAGAT TTGACAATAG GAATTTTGCT TTCTTTTTCA
ATGGCTTTTG GTGTAGTTTT AATCTCCTTT TCTAATAATT ATAATTCTGA TTTATTTGCA
TTTTTGTTTG GAAATATCTT AACAATCACA AAAGAAGATT TAATTTACAT TTCTATCTTT
ACAGTTTTTA CCATTGGATT TTTACTTAAA TACTTTGACG AAATTCTTTA CTGCTGTTTT
GATGAAGACC TTGCTTATAT TGGCGCAGTT AATACAAACT TTTTATACTA CAGCGTGATA
ACGTTGATAG CAATAGCAAC TGTTTTATCT ATAAAGCTTG TAGGGTCTAT TTTATCAGCT
GCGATGATAA TCTTGCCAGC TGCTGTCTCT TCTCAACTTA CATGGCATTA TAAAAAGATT
ATTACTCTTT CTATTATATT TAGTCTAATA ATTGTAAGTG CCGGAATAAT TCTTTCATTT
TATTTTAACC TTCCATCCGG CTCAACGATA GTTATACTTT ATTCTATCGT GTTTTTTGTG
ATAGTGATAG GGAAAAGGCT ATTTTAA
|
|---|
| Protein sequence | MSFLDIFTVP FMLNAFIGGL LVSVLLSVLS FFIYVKKWSF INVGISHAAF GGLAIGFFAG
INPTLTGSIF AVLVGVLIGY ISKKGKIHED LTIGILLSFS MAFGVVLISF SNNYNSDLFA
FLFGNILTIT KEDLIYISIF TVFTIGFLLK YFDEILYCCF DEDLAYIGAV NTNFLYYSVI
TLIAIATVLS IKLVGSILSA AMIILPAAVS SQLTWHYKKI ITLSIIFSLI IVSAGIILSF
YFNLPSGSTI VILYSIVFFV IVIGKRLF
|
|---|
| |