| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1098 |
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| Symbol | |
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| ID | 6332420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1141545 |
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| End bp | 1142861 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657384 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001931269 |
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| Protein GI | 188997018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGG CAGTTATAGG TGCAGGATTA GCCGGTTCAG AAGCAGCATA TAAAATAGCC
CAAGCAGGAT ATAAAGTAGA CCTTTATGAA ATGCGACCAG AAAAACAAAC TCCAGCACAT
AAAACCCCCT ACTTTGCTGA AATCGTATGT AGCAACTCTT TTGGTAGTGA ATCTTTAACA
TCCGGAGCAG GTTTATTAAA AAAAGAGATG GAAGTTTTAG GCTCTATTAT TTTAGATGTT
GCAAAAGAAT TTAAAGTTCC CGCCGGTCAG GCATTTGCAG TGGATAGAGA AAAATTCTCT
AAAAAATTGA CAGAAATTTT AGAAAACCAT CCAAACATAA ATGTAATAAG ACAGGAAGTT
AAAACCTTGC CGGATGCAGA TATAATCGTA ATTGCAACCG GACCCCTTAC ATCAGAAGAG
TTTTCTAAGG AGATTCAAAA AATTACAGGA AGTGAGTATT TATACTTCTA CGATGCAATA
GCTCCTGTAG TTGATGCTTC AACGGTTGAT TTTTCAAAAG GATTTTGGGC TGATAGGTAC
GGAAAAGGAA CAGGAGATTA TTTTAACTGT GTATTATCTG AACAAGAGTA TGAAATTTTT
TATCAAGAGC TTTTAAAAGG TGAACAAGTA CCATTAAAAG ATTTTGAAAG AGCTGTATAT
TTTGAAGGTT GTCTTCCAAT AGAGGAAATA GCACGAAGGG GAAAAGAAAC CCTTTTATAT
GGTCCAATGA AACCTGTTGG ATTGATAGAC CCAAAAACAG GTAAAAGGCC TTATGCAGTG
GTTCAACTAA GAAAGGAAAA CATAGAAGGA ACTCTCCTTT CTTTAGTAGG TTTTCAAACA
AAGCTAAAAT ATCCAGAGCA AAAGAGAATT TTTAGCTTAA TACCTGCATT AAAAGATGCT
GAATTTGTTA AACTTGGTTC TATTCACAGA AATACATTTA TCCAATCTCA AAAATTGTTA
AAACCAACTC TACAGCTTAG AAAAAAACCT AACATATTGT TTGCCGGGCA GATTACAGGA
GTAGAAGGAT ATATGGCATC CGCTGCAACT GGCATTATTG CTGGTATAAA TGTAGCAAGA
ATGTTGGAAG GTAAAGAGCC AGTAGTTCCA CCAAAAACCA CAATGATAGG TGGGCTTATA
AACTACATAA CAACAGCAAA AAATGAACTT CAACCAATGG GTCCAAACTA TGCACTTCTT
CCGGAGCTTG AAGAAAAGAT AAAAGGAAAG GAAGAAAGAA AGTTAAAAAA AGCAGAAATT
GCACTGAAAG ACATAAAAGA ATGGACAAAA GAGATAGAAT CGGCTGTTTT TATCTAA
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| Protein sequence | MKVAVIGAGL AGSEAAYKIA QAGYKVDLYE MRPEKQTPAH KTPYFAEIVC SNSFGSESLT
SGAGLLKKEM EVLGSIILDV AKEFKVPAGQ AFAVDREKFS KKLTEILENH PNINVIRQEV
KTLPDADIIV IATGPLTSEE FSKEIQKITG SEYLYFYDAI APVVDASTVD FSKGFWADRY
GKGTGDYFNC VLSEQEYEIF YQELLKGEQV PLKDFERAVY FEGCLPIEEI ARRGKETLLY
GPMKPVGLID PKTGKRPYAV VQLRKENIEG TLLSLVGFQT KLKYPEQKRI FSLIPALKDA
EFVKLGSIHR NTFIQSQKLL KPTLQLRKKP NILFAGQITG VEGYMASAAT GIIAGINVAR
MLEGKEPVVP PKTTMIGGLI NYITTAKNEL QPMGPNYALL PELEEKIKGK EERKLKKAEI
ALKDIKEWTK EIESAVFI
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