| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1083 |
|---|
| Symbol | |
|---|
| ID | 6332092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1126049 |
|---|
| End bp | 1126663 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001931254 |
|---|
| Protein GI | 188997003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.2808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG ATGTTAAAAA TTTAAACGAA ACTCAAATAT ATAAACTTAT GATAAGTACT
ATTGTTCCAA GACCTATTGC TTGGGTTTCC ACTGTATCAA AAGATGGAAT ATTTAATATA
GCACCTTTTA GCTTTTATAT GGGAATATCT TCAAGCCCAC CTCTTATTGC AATCTCTATT
GGGAAAAAAG ATGATGACAG AAAAAAAGAC ACTTGGAAAA ACATTGAAGA AGTGGGAGAT
TTTGTCATAA ACATAGTGAC CTATGACCTT GTCGAAAGAA TGAACATTAC CGCATCACCG
TTTGATGAAA ATATAGATGA ATTTAAAGAA GCAAATCTTA CACCTATAAA ATCTGATTTA
GTAAATTCCC CGAGAATTGC TGAATCACCT ATTAATATAG AATGTAAAAA GTTTATGATT
TTAGAAATTG CAGATATGGG ACTAATTTTT GGAGAGATTT TGAAATTTCA TATAAAAGAC
CAGCTACTTA ACGAAAAAGG ATACGTAGAT AATAAAAAGT TAAAAGTAGT TGGAAGACTC
GGTGGAGCTG ATTATTGTTT GGTTGATGAA AGTAATATAT TTAATCTTAT CAGACCGGAT
TTAAAAAAGA GGTAA
|
|---|
| Protein sequence | MEFDVKNLNE TQIYKLMIST IVPRPIAWVS TVSKDGIFNI APFSFYMGIS SSPPLIAISI
GKKDDDRKKD TWKNIEEVGD FVINIVTYDL VERMNITASP FDENIDEFKE ANLTPIKSDL
VNSPRIAESP INIECKKFMI LEIADMGLIF GEILKFHIKD QLLNEKGYVD NKKLKVVGRL
GGADYCLVDE SNIFNLIRPD LKKR
|
|---|
| |