Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1082 |
Symbol | |
ID | 6331947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1125372 |
End bp | 1126049 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657368 |
Product | hypothetical protein |
Protein accession | YP_001931253 |
Protein GI | 188997002 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.396045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCT ATATTATCAA TGAAATGAAA AAAGAAGAAT CTTGGAGGTT ATTTAAAATA ATTGGAGATT TTATCGATGG ATTTGAAGTT ATGCCAAATT ATCTACCTTC TGTTACTATT TTTGGTTCTG CAAGGGTAGA GGAAGGAAAC AAATACTATG AAGCTGCAAG AGAGTTAGCT TTTAAACTTT CTAAAAAAGG ATTTTCGATT GTAACCGGCG GTGGACCGGG AATTATGGAA GCTGCAAACA GAGGAGCATT TGAAGCAGAC GGAAATTCGA TCGGTTTAAA CATAAAACTT CCAAAAGAGC AAAAACCAAA CAAATACCTT ACAGAAATCT TAAATTTTAA TTATTTTTTT GCAAGAAAGG TTATGTTAGT AAAGTATGCA ACAGCATTTG TCCTATTTCC AGGAGGGTTT GGAACCCTTG ATGAGATAAC GGAAACATTA ACTTTAATAC AAACAAAGAA GCTTAAACCT TTTCCAGTTA TACTATACGG AAATGAATAT TGGAATGGAT TTGTACAATG GCTTAACGAT GTGGTAGTAA AAGATGGATA TATTGATAAA GAAGATACGG AGCTATTCAA ACAGATGGAT GACATTGATG AAATTGTTGA TTATATTGAC CAGTGGTATA TTAAAAATAG TACAAAATTG ATAGGAGAAA ATGATTAA
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Protein sequence | MNSYIINEMK KEESWRLFKI IGDFIDGFEV MPNYLPSVTI FGSARVEEGN KYYEAARELA FKLSKKGFSI VTGGGPGIME AANRGAFEAD GNSIGLNIKL PKEQKPNKYL TEILNFNYFF ARKVMLVKYA TAFVLFPGGF GTLDEITETL TLIQTKKLKP FPVILYGNEY WNGFVQWLND VVVKDGYIDK EDTELFKQMD DIDEIVDYID QWYIKNSTKL IGEND
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