| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1063 |
|---|
| Symbol | |
|---|
| ID | 6332698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1104013 |
|---|
| End bp | 1104951 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642657351 |
|---|
| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| Protein accession | YP_001931236 |
|---|
| Protein GI | 188996985 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAA ACATACTTAT TACAGGTGGT GCAGGATTTA TTGGCTCTAA CCTTGCTTTA
AAACTACAAA AAGATTATCC AAACAGCAAA ATCTTAGTTT TAGATGATTT TTCAAGTGCT
AATTTTAAAA ATTTAAAAGG TTTTAAAGGA ATAGTTTATT CCTGTGATGT ATCAACAGAT
GAGCTTTTTT TTAAGGTGGA AGATTTTAAG CCAGATGTAA TTTTTCATCT TGCATCTATC
ACAGATACAA CAGTAACTGA CCAAGAGTAT ATGATGAGAA GAAATGTTGA CGGTTTTAAG
AATATATTAG AGTTTGCTTA CGATAATGAA TGCATTGTAG TGTATGCATC ATCTGCTTCT
GTGTATGGAA ATGTAAAGGA GCATGTACCA TTAAAGGAGG ATAGAGAAAA ATCTCCTGAA
AATGTGTACG CTTTTTCTAA ATACATCATG GATAACCTTG CACAAGAGTT TAGCGATAAA
ACAGGACTAA AAATCGTAGG CGTTAGATAC TTTAACGTTT ATGGTCCAAG GGAAGCCCAC
AAAGGAAAGT TTGCAAGCAT GATTTATCAG CTTTATTTAC AGATGAAACA AGGAAACAGA
CCAAGAATTT TCAAATGGGG TGAACAAAAA AGAGACTTTG TATATGTTAA AGATGCAGTA
GATGCTACTA TTTTAGCAGC AAAAGCTCCA AAATCTACTG TTTATAACGT CGGAAGTGGA
GAGGCAACAT CTTTTAACGA TGTAATTAAA TATTTAAATC AAGCACTTGG AACAAATTTA
GAGCCAGAAT ATTTTGACTG TCCTTACGAT TTTTATCAAG AGTACACCCA AGCAGATATG
ACTAAGATTA AAGAAGAGCT TGGATTTGTG CCAAGATATA GCATACAAAG AGGCATCAAA
GAGTATGTTG ATATTTTAGA AGGAAGAATA AATGACTAA
|
|---|
| Protein sequence | MYQNILITGG AGFIGSNLAL KLQKDYPNSK ILVLDDFSSA NFKNLKGFKG IVYSCDVSTD
ELFFKVEDFK PDVIFHLASI TDTTVTDQEY MMRRNVDGFK NILEFAYDNE CIVVYASSAS
VYGNVKEHVP LKEDREKSPE NVYAFSKYIM DNLAQEFSDK TGLKIVGVRY FNVYGPREAH
KGKFASMIYQ LYLQMKQGNR PRIFKWGEQK RDFVYVKDAV DATILAAKAP KSTVYNVGSG
EATSFNDVIK YLNQALGTNL EPEYFDCPYD FYQEYTQADM TKIKEELGFV PRYSIQRGIK
EYVDILEGRI ND
|
|---|
| |