| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1053 |
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| Symbol | |
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| ID | 6330978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1090910 |
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| End bp | 1092946 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657341 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001931226 |
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| Protein GI | 188996975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTT ATCTACTTGA AATAGGGTGC GAAGAGCTTC CACCAAAAGC TATATTAACG
TACAAAGAAT TTTTAAAAGA ATACGCACAC CAGACATTTA AAGACTTTTT TATTTACAAT
TCTCCAGAAA ACATAAAAAT ATACGCAACG CCAAGAAGAT TAGCAGTCTT AATAAAAAAT
CTCAAAAAAA AGCAAGATAA TCAAAAAATT ACATTAATTG GACCTCCATA CAAGGTAGCC
GTTGACAGCG AAGGTAAATT TACAAAAGCA GCATTATCTT TTGCAGAAAA AAACAATATA
CCGCTTGAAA AGCTTGAAAA AATCACAACA GAAAAAGGCG AGTACTTAGG AGCCACCATA
GAAAAAGAAG GAGAAAGCTT AGAATTATTT ATCAAACACA AAATCCCACA GCTGTTTAAT
CAATTTCCAC AGCTTAAATC TATGAAATGG AACAACTCAG ATTATAGATT TCCAAGACCA
ATAAGATGGA TAGTGTCTTT GCTAGATGAT AAAGTTATAG AATTTGAAGT TGCATCAGTA
AAAACAGATA GGTTTACACA TCTTCACAGA TTTATGACAA AGCCAATTGG AAGAGGAGAA
AGAAAAGATA TAAACCATGC AAATGACTAT GAAGAAATCA CAAAGCTTGG ATACATAATA
GCAAACTTTG AAGACAGAAA ACACTCAATT AAAACCCAGT ACGAAGGCTT TGCAAGACAG
TTAAACGCAA GCATTATAGA AGATGATGAG CTTATCGATG AAATAACATG TTTAACAGAG
TTCCCGGTTG GCATAGTAGG AGATTTTTCA CCTGAATATC TTACACTTCC AAAAGAAGTT
ATCATTACAG TTTGCAAGCA CCACCAAAGA TATCTAAACT TTGAAAAAGA TGGAAAGCTA
ATTCCAAAAT TCCTTGCTTT TTCAAACAAT GCAGTAAAAG ATAGGGATAT AGTAAAAAAT
GGCTATGAAA AAGTTTTAAG AGCAAGATTA GAAGATGCTT TATTCTTCTA CAAAGAAGAC
TTAAAGAAAA AACTTGATGA TAATATAGAA AAGCTTAAAG GTATTCAGTT CCATGAAAAG
CTTGGCTCTA TGTATGACAA AGTATTGAGA AACTTAGAAC TTGCTTTAAA ATTAGCTGAT
TTAACCGGAT ACAAAGATGC TGAAAAAATA AAAAGAGCAG TTATGCTTTC TAAGGCTGAT
TTACTTACAG AAATGGTAAA AGAGTTTGAC GAGCTACAAG GCATAATGGG AATGTATTAC
AGCCAAAAAC AAGGAGAAGA GGAAGAAATA TCAAAATCAA TCTATGAGCA CTACCTTCCA
AAAACAGCAG AAGACAACAT TCCAGAAACA AACCTTGGAA CGCTTCTTGC ATTAGCAGAC
AAACTTGATA CTGTAATTTC TTTCATAAAA ATTGGAGAGC TTCCAAAACC ATCAGCCGAC
CCATTTGGAA TAAGAAGAAA CGCAATAGGA ATAGTAAGGC TTTTAGTTGA GAAAGAGATA
GATTTAGATT TAAGGAAAGT CATAGATGAT GAAAGTATTT TAGATTTTAT ACTGTCAAGA
TTAGAAAGCT ATCTTCAGTC AAAAGGCTAC AAGACTGACA TCATAAATGC TGTACTATCT
CTAAAAGATG GAAATATATA CAGAAATTAT CTAAAAGTAA AGGCATTATC ACAGCTAAGA
AACCTACCGG ACTATGAAAA CGTGATAATG GTATTTAAAA GAGTTGGAAA TATCATTCCA
GAAGATTTTA AATTTTCAAA CGTTGATGTA AACTTATTAG TATCACAGCC AGAAAAAGAA
CTTTACAAAA AATTTATAGA AATTAAAGAT AAATTTAAAC GGTTTATTGA AAACAAAGAT
TACGATAAAG CCTTAGGATT ATTGCTTGAA TTAAAGCCAT ACATAGACAG ATTTTTTGAC
AATGTTATGA TAATGGTAGA AGATGAAAAA CTTAAAAATA ACAGACTAAG TCTGCTGAAA
GAAATCAACG ATTTATTTAG AAATATAGCA GATTTTACAA AATTAATTGG AGGTTAA
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| Protein sequence | MKSYLLEIGC EELPPKAILT YKEFLKEYAH QTFKDFFIYN SPENIKIYAT PRRLAVLIKN
LKKKQDNQKI TLIGPPYKVA VDSEGKFTKA ALSFAEKNNI PLEKLEKITT EKGEYLGATI
EKEGESLELF IKHKIPQLFN QFPQLKSMKW NNSDYRFPRP IRWIVSLLDD KVIEFEVASV
KTDRFTHLHR FMTKPIGRGE RKDINHANDY EEITKLGYII ANFEDRKHSI KTQYEGFARQ
LNASIIEDDE LIDEITCLTE FPVGIVGDFS PEYLTLPKEV IITVCKHHQR YLNFEKDGKL
IPKFLAFSNN AVKDRDIVKN GYEKVLRARL EDALFFYKED LKKKLDDNIE KLKGIQFHEK
LGSMYDKVLR NLELALKLAD LTGYKDAEKI KRAVMLSKAD LLTEMVKEFD ELQGIMGMYY
SQKQGEEEEI SKSIYEHYLP KTAEDNIPET NLGTLLALAD KLDTVISFIK IGELPKPSAD
PFGIRRNAIG IVRLLVEKEI DLDLRKVIDD ESILDFILSR LESYLQSKGY KTDIINAVLS
LKDGNIYRNY LKVKALSQLR NLPDYENVIM VFKRVGNIIP EDFKFSNVDV NLLVSQPEKE
LYKKFIEIKD KFKRFIENKD YDKALGLLLE LKPYIDRFFD NVMIMVEDEK LKNNRLSLLK
EINDLFRNIA DFTKLIGG
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