| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1040 |
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| Symbol | |
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| ID | 6332133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1078218 |
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| End bp | 1078853 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657328 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001931213 |
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| Protein GI | 188996962 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACT TAGAGTTATG CATTTTTGAC CTTGATGGGA CACTTCTCGA TTCAGGAAAA
GATATAGCCT TAGCAGCAAA CTACGCATTT GAAAAGTTGA ATCTTAAAAC ATTTTCAGAG
GAAGAGATAA TCTCAAAGGT TGGGTACGGA GCAAAAAAGC TTATAGAAGA CTTAATTCCA
GAATATCCAC AAGAAATTAA AGATAAAGCA TTGGAATACT TTAAAGAGTT TTACTATTCA
AATCCTGTAA TATATTCAAA ACTTTATGAT GGAGCTGAAG AGACATTAAA AAAATTGAAA
GAGCTTTCAA AAAAAGTTGC AGTTGTAACA AACAAATATG AAGCCTTATC TATTGAAATC
TTAAAAAAAT TAAATGTTAT TGATTATATT GACTTAGTAG TAGGAGCTGA TACAACATCA
GAAAAAAAGC CTCATCCATT GCCGGTTTTT TACACATTGG AAAAGCTAAA ATCCGATAAA
GATAAAAGTA TAATCATAGG TGATAGTGAA ACTGATGTTT TAACAGGAAA AAATGCAGGA
ATAAAAACGG CATTAGTTTT ACAAGGTTAT GGAAATAAAG AGCTTGCATT ATCTTTAAAT
CCGGATTATG TATTAGATAG TTTAAAGTTT ATATAA
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| Protein sequence | MKHLELCIFD LDGTLLDSGK DIALAANYAF EKLNLKTFSE EEIISKVGYG AKKLIEDLIP
EYPQEIKDKA LEYFKEFYYS NPVIYSKLYD GAEETLKKLK ELSKKVAVVT NKYEALSIEI
LKKLNVIDYI DLVVGADTTS EKKPHPLPVF YTLEKLKSDK DKSIIIGDSE TDVLTGKNAG
IKTALVLQGY GNKELALSLN PDYVLDSLKF I
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