| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0987 |
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| Symbol | |
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| ID | 6331422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1020646 |
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| End bp | 1021428 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657277 |
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| Product | glutamate racemase |
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| Protein accession | YP_001931162 |
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| Protein GI | 188996911 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.507565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAATTG GTATATTTGA TTCAGGGATA GGTGGACTTA CCGTATTTAA AGAGATAGCT
GCAAGCTTTC CAAAGGTAGA TTTATACTAT CTTGGAGATA CAGCAAGAGT TCCATATGGA
AACAAATCAA AAACGACGAT TATCAGATAT TCTGTAGAAT GTGCTAGTTA TCTGTATCAT
AACTATAATG TAGATGCGAT AGTAATAGCC TGTAATACAG CCTCTTCATA TGCACTTGAT
ACATTGAGAG AAATATTACC GATTCCTGTA ATAGGCGTAG TTCAGCCGGG AGCAGAATCG
GCAGTAAAAG TAAGTAAAAA TAAAAAAATT GGTGTGATAG GTACATCAGC AACTATAAAG
AGCAATTCTT ACTTTGAGAC TTTAAAAAGC TTAGATAAGG ATTTAGAAAT CTATCAAAAA
GCTTGTCCGT TGTTTGTTCC GCTGGTAGAA GAAGGCTGGA TAGATAATGA AGTAGCAAAG
TTAACAGTTA AAGAGTATCT TGACGACCTT GTTAAAACAG GAATTGATAC GCTTATACTT
GGATGTACCC ATTATCCACT TTTGAAAAAC ACAATAAAAG GTTTGTATCC ACATTTAAAT
ATAGTTGATT CGTCTGTCGC GATAGTTGAA CATCTAAAAA ACATAAAACT AAATATTGAA
GAGACAGGAA AAAGAAAGAT TTTTATAACC GATGAGTCTC ATGCTTTTGA TAAGTTGAAA
AATATGCTTG TTGGAGATAT TAAGACAGAA AAAATAGAAC TTTCAGACCT ATGCTCTCTC
TAA
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| Protein sequence | MPIGIFDSGI GGLTVFKEIA ASFPKVDLYY LGDTARVPYG NKSKTTIIRY SVECASYLYH
NYNVDAIVIA CNTASSYALD TLREILPIPV IGVVQPGAES AVKVSKNKKI GVIGTSATIK
SNSYFETLKS LDKDLEIYQK ACPLFVPLVE EGWIDNEVAK LTVKEYLDDL VKTGIDTLIL
GCTHYPLLKN TIKGLYPHLN IVDSSVAIVE HLKNIKLNIE ETGKRKIFIT DESHAFDKLK
NMLVGDIKTE KIELSDLCSL
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