| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0985 |
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| Symbol | |
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| ID | 6331505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1019338 |
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| End bp | 1020273 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657275 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001931160 |
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| Protein GI | 188996909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.233637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TTGTTGTATT TTTAATTTCA GGATTGGTAA TAATTTCTTG TGCAGATAAA
GGGCAAAAAC TCTATGAAGG GCAGGAAAAA CTAAGTAAAG GTCTTGAACT TTATAAAAAA
GGTGAGTATA AAAAGGCAAA AGAAGAGCTT AAAAATGCAA TCTTTAAATC TCAAGGTTTA
ACACCTGCTC AAATCATGGA AGCAAGATTT GCATTAGCAG ATTCTTACTA CAACAGAGAA
GAATACATAG ATGCAATAGT AGAATTTGAG GAGTTTATAG CACTATTTCC AACATCTCCA
AGAATGCCAG AAGCTTTATA TAAACTTGCC ATGTCTTACC TTTTTGTATC CCCGGACTAT
AAAAGGGATA TGACCTATGT TAACAAAGCA CAAGAAAAAG CGGAAGAGAT AATTTCAAGC
TATCCAGACA GTAAGTATGT TAAAGCAGCA AAAGAGATTT TAAAGAAAAT AAATGAAATA
AAAGCTAAAC ATACCTTGTA TATTGCAGAA ACATATGAAA AGTATGGAAA GCCATACTCA
GCTTCTGTAT ACTATCAGGA AGCTTATACA AACTATAAAG ATTACATAGA AAAAGACTAT
GTAGCATACA AACTTGCATA TAATTTAATC AATGCAGAAA ATCAGTATGT AGGAGAAATA
AACGAGCTAA GACAAAAAAT AAAAGAATTA GATAAAAAAA TCAATGAAGA GAAAGATTTA
GAATCTAAAA ACATACTTAT AAACAGAAAA GCGATTCTTG AGCAAGAACT AAATGTATAT
CTAACAAGAA TAGAAGAATC AAAGCAGAGA GCAAAAGAGA TTATAGAAAA CTTTCCAAAA
GCATTTCCAG ATTCTAAGTA CTTAGCAGAA GTCAAAAACC TTGAAAAAAG TAGTAATTTG
CAAAAATTAT TAAGAAAAAT AGATATCTTT AATTAA
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| Protein sequence | MKRFVVFLIS GLVIISCADK GQKLYEGQEK LSKGLELYKK GEYKKAKEEL KNAIFKSQGL
TPAQIMEARF ALADSYYNRE EYIDAIVEFE EFIALFPTSP RMPEALYKLA MSYLFVSPDY
KRDMTYVNKA QEKAEEIISS YPDSKYVKAA KEILKKINEI KAKHTLYIAE TYEKYGKPYS
ASVYYQEAYT NYKDYIEKDY VAYKLAYNLI NAENQYVGEI NELRQKIKEL DKKINEEKDL
ESKNILINRK AILEQELNVY LTRIEESKQR AKEIIENFPK AFPDSKYLAE VKNLEKSSNL
QKLLRKIDIF N
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