| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0976 |
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| Symbol | |
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| ID | 6332771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1008067 |
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| End bp | 1009614 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657265 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001931151 |
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| Protein GI | 188996900 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000560326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC AAGATATGCA AAAGAGGTTT ATGATATTTT TTGGAGCAGT TGCACTGCTT
CTAATATCTT TTTCTCTAAT CAGTCAATAT TTTTTTAAAG ACAGTACTCA AAATCAAAAA
AATCAAACTC AGCAGACTCA AAGAGAGGTT GCGGCTCCTA TTAAACAAAT TAGCGGAAGT
TATGACCTTG TCTTAACTGG CGAAAGAGTA AATACTGATA ATTTAAAAGA TTTGGTTAGA
ATTAAAACAA AGGAAGGCTA TATAGAGTTT AGTAATATCG GCGGTAGAAT AGTATCAGCT
TTTGATAACA GATATAATGT TGATATTATT CCTGAATTTT CTAAATCTAA TAAAGTTTTT
CCTGGAGAAA TTATAACCAC AGATATAAAT ACTACAAAAC TTTTAAACTT TTCAAAATAT
GAATCAAAAA TTCAAGATAA TAAAATCTTA TTTTACTTGA AAAATGAAAA TGTAGAAGTT
GAAAAAACTT ATACAATTAA CGATGATAAT ACTATAACAG TTGACATTAA AACCAAAGGT
CTTGAAAATG TAGGATTAGC ATATTTAACA GGTATAACTT TAAAATCTGA GGGAACTTTT
GGACACAATG GACCTATCAT TAAGACTGAC AAGGAAATTA TAAAAATAAA CAACGATATT
AATACTATTC AAACAATCAG AGATAAAATA CTTTGGGCTG GTCAAGAAAA TAAATATTTT
ATGCAGATTC TGTCGATTAA AGGTGGCATA AACACTGTTT ATATAGTTCC GGTTGCAAAA
GATACTACCG TTGTTTTATC TGAAATCCCA GCATCTTTTG AAGGATTTAA TTATTTAGGT
CCAAAACTCT ACTCACTTCT TGGAGAAATT ACAGATAAGT ATCAAAAGCT TTGGAATGTA
GATTTAAATT TAAGAAGTTC TGTTGATTTT GGCTTCTTTG GTATTCTTGG AAAACCTTTA
TTCCTACTGC TTCATTTTAT ATATGACTTT GTCCATAACT GGGGGTTGGC AATCATTGTC
TTAACTGTAT TATTAAGACT TGTGTTATTC CCGCTTAATC ACAAATCTCT AAAAGCAATG
AAAAAAATGG CAGACCTTGC TCCAGAAATG GAAAAACTTA AGAAAAAATA TGCAAAAGAC
CCACAAAAAC TACAAGAAGA AATTATGAAG CTGTACGCAG AAGCTGGAGC AAATCCAATG
AGTGGATGCT TGCCAATTCT TGCTCAAATC CCTATATTCA TAGCATTATA CAATGTTTTA
ATGGTAACAG TTGAGTTAAA AAATGCTCCG TTTATGCTTT GGATAAAAGA CCTTTCAGAT
AAAGACCCTT ACTATGTTTT ACCAATCTTA ATGGGACTAT CAATGGTTGC TCAGCAGTTT
ATAACTCCAA GCTCTGATAA AAATCAAAGA ATGATCATGT ATATTATGGC TGGTGTGTTT
ACATTTATGT TTATGAATTT TCCATCAGGA CTTGTTTTAT ACTGGCTAAC GAATAATATA
TTAGGATTAA TTCAAAGTGT TATTATTAAC AAATCAATGA AAAAATGA
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| Protein sequence | MEQQDMQKRF MIFFGAVALL LISFSLISQY FFKDSTQNQK NQTQQTQREV AAPIKQISGS
YDLVLTGERV NTDNLKDLVR IKTKEGYIEF SNIGGRIVSA FDNRYNVDII PEFSKSNKVF
PGEIITTDIN TTKLLNFSKY ESKIQDNKIL FYLKNENVEV EKTYTINDDN TITVDIKTKG
LENVGLAYLT GITLKSEGTF GHNGPIIKTD KEIIKINNDI NTIQTIRDKI LWAGQENKYF
MQILSIKGGI NTVYIVPVAK DTTVVLSEIP ASFEGFNYLG PKLYSLLGEI TDKYQKLWNV
DLNLRSSVDF GFFGILGKPL FLLLHFIYDF VHNWGLAIIV LTVLLRLVLF PLNHKSLKAM
KKMADLAPEM EKLKKKYAKD PQKLQEEIMK LYAEAGANPM SGCLPILAQI PIFIALYNVL
MVTVELKNAP FMLWIKDLSD KDPYYVLPIL MGLSMVAQQF ITPSSDKNQR MIMYIMAGVF
TFMFMNFPSG LVLYWLTNNI LGLIQSVIIN KSMKK
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