| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0938 |
|---|
| Symbol | |
|---|
| ID | 6332462 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 975223 |
|---|
| End bp | 977404 |
|---|
| Gene Length | 2182 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 29% |
|---|
| IMG OID | 642923934 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00251009 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA AGCCATTTTT GAAGAAGTTT AAAAAGTCAG ATATGCTTAT CATAATGGAG
CATACGGGAG TTTACCATTT AAAGCTTGCT AATTATCTGT ATGAAAATGA CTATAATGTA
GCAGTAATAA ATCCATTTTC AATAAAGAAA TTTATGGAAG CTAAAATGAC AAGAGTTAAA
ACAGATAAAG CTGATTCATT CTTTATAGCA GAATATGGAA GAACGTTTTT CGATGGAGAG
CTTTATAAAC CAAAATCAGA GGTAGAAAAA GAAATAGAAG TAAAACTAAA GATATTAGAA
GACTTACAAC AGCAGCTTAC AATGTTAAAA AACAAAAGAG AATCATTAAG TCATGTACCA
ATGAAAAAAC TGAAAGAGAA TTTAGAATAT TACGATGAGC TAATTAGAAA AATAGAAAAG
AGTATAAAAG AACTTGAGAA AGAGATAAAA GAATTGTCTA AGAAGAATTA TCAAGAGGAA
TACAAACTTT TAAAAAGTAT ACCTGGTATA AGTGATAGGA CTATAGGAAT GATAATATCA
GTATATGGAG ACTTGTCAAT AATTTTGTGT CTGGATTGAA AACTTTTTAT TAAACAATTG
TAAAATTTCA TAAGAAGCTC CTTTAAAAGC AGGTATAGAC TTATTCAATT TTCCATTCTT
TAAATTATCT TTCTGGATAA GCAGATTTAC CTCAAGAATG TCCACAGATT GAAAATATCC
ACCTAAATTT ATTCTTACCT TCTCTATCAT GCTATTAACA CTTTCAACTG GATTTGTTGT
GTATATGTGT TTTCTTAGAT TTTCTGGATA TTTTTAAAAA ACATAAGTAT CTCTCTTTGT
TAGATTGAAT ATGTTTTATA AAGCTTGGAT ATTTAGATTT AAATCTACTA CATAAATCAT
CTAATTTTTC TAATCCATCT TCATAATCTA AGCTGTTTTC TTTTATGTTT TTCAGCTCTT
TGTTAAATGT TTGCGAATCT TCCTTACCCA TTTGACTTTT GACATTTCTT TGTAAATGGA
CTAAACATAG CTGATGGTCT GTAAAAGGAA ATAGTGTTTC TATGGCTTTT GATATTCCAG
GAAAATCATC ACTTACTATA AGCATTACCC TTTTTAGTCC TCTATCTATT AAATCATTGA
ATACTTTTAT CCAGTCTGCT TTATTTTCAC TACTGAAAAA TGTATAAAAT CCAAATATAT
CCTTATTTCC TTGTAAATCT ATTCCAAGAA CTACATAGAC AGAAGCTTTT CTTATTTTGT
TTTTTTCTTT TATATCACAG CGGTATGCGT CTATATACAG TACAAATACA TCTGATGGAA
GCTCTCTTGT TTTGAAATCA CTCAAGTCTT TCTATAAGCT GTTTTTTAAT TATATCCATA
TGTTGTTTGA ATAGCTTAAG CCTAAGCTTT TTAATGTAGA ATCTATCTTG CTTTCTGAGT
ATCCATTGGA TACTAAACTC ATAAGAAGGT CTAAATAATC TTCATTAACT CTTTTGTATG
GGCCAGGTAA TATTTGTGGT CTAAATCTAC CCTTTCTATC TCTTGGGACA TTTATGTTAA
GCTTGAAAGA ACCTGTATTT AGACTTCTTT CATATTATCC GTTTGCTTTG TTGTCTTTAT
CATTTTCAAG AAAGAAATTT CTTTCCTGAT TCATAATCAG TTCCACAACA GATTCTAAAA
GCTTTCTTAT ACCTATCTTT TCTTCTTGAG TTGTTATACC GTTTGGGAAA AGTTCTTTTA
CTAATTCTTC GGTAGATCTG TCTAATATTT TTTTCAAAGT ATTCTTTCTT ATCCATTACT
ACTCCTCCTT ATAATTTTAT TTAGACACAA CATTATTTTA ACTCCCATAA TATCAGTATG
TGGAAATTTT GAAAGATTCA AGAGTGTAAA AGATATATCG AGTTTTATAG GAATCAGTCC
AAGCCCATAT GAAAGTGCAG CATGTGTAAA GAAAAGTGGC TGGATAAAGA AGATGGGAAA
TCCATATGTA AGAAAGATAT TATACATGGC AGCATTATCA GCAATAAGGT TTAACAAATA
CTGCAGAGAA TTATACGAAA GATTAGTAAG TAAAGGTAAG GCTAAAAAGT TAGCATTAGT
GGCTGTAGCA CATAAGTTAT TAAGGCAAGC ATATGGTGTA TTAAAAAGCA GAAGACCATT
TGATGAAAAT TTTTGTACTT GA
|
|---|
| Protein sequence | |
|---|
| |