| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0892 |
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| Symbol | |
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| ID | 6331071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 927166 |
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| End bp | 928485 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657183 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001931074 |
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| Protein GI | 188996823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000122441 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAATTT TAGCTTTTTT AATAATGCTT GGAGTATTGA TTACGATACA TGAATTTGGA
CATTTTCTTT TTGCGAGAAT GTTTGGCGTA AAAGTAGAAA CATTCTCCAT AGGCTTTGGA
CCACCAATAT TTAGATGGAA AGGAAAAGAA ACAGAGTACC AAATAGCACT TATTCCCCTT
GGTGGATACG TAAAAATGTA TGGCGAAGAT TCAATGACAG AACCAGTACA AGGTGAAGTT
AATAAAGAAG CCTACAACGA CCCAAGGTCT TTTCATTCAA AAGCAAGATG GCAAAAAATG
TTAATAGCAT TTGCCGGACC ACTTTTTAAC ATAATCCTTG CAATAGTTTT ATTTATAGCT
GTTTACGCAA TAGGTATAAA AGAACCAGCG TATTTAACAC AGCCACCGGA AATAGGATAT
GTTGAGAAAA ACTCTATTGC TGAAAAAATA GGACTACAGC CGTTTGACAA GATTTTAAAA
GTAAATGGCG AAGAAGTTAA AAATTGGAAA GATTTAACAA TTAAATTAGC AATGAAATCT
GGTAAAAATA TAGATATAGA GTTTTTAAGA AATGGTAATG TCTATAAAGT ATCCGCTACG
CTTCCAGAAG ATATGACAAA AGATTCTTTC GGCATTTCTC CAATAATAGA GCCAAAGGTT
GGTAAAGTTT TACCAAATAC ACCGGCAGAA GAAGCAGGTT TAAAAGAAGG CGATATTATT
ATTGCTGTAA ATGGAAAGCC AATAAGGACA TGGTTTGAAT TTGTAGATTT TATGTCCAAC
CTGAACGAAA AAAGAGACAT TAACCTTCTT GTTAAAAGGG ATGGAAAAGT TATTTCTTTA
ACAATAACAC CAGAATACAA TCAAGAACTT AAAAAATATA CAGTAGGAAT ATCTCCAAAA
TTTGAAGTAA AGACCATTCA GTATCCTATA GACCAAGCAA TAGTAAAAGC ATTTGATAAA
ACAAAAGAGT TAACAGCATC AATATATAAG GTAGTAGCGG GTTTATTTAC AGGTGAAGTA
TCATTTAAAA CCCTTGGTGG TCCTATCTCT ATTGCTAAAT TCTCGGGAGA AGCATTAGAA
ACTGGAATTG CAACATTCTT ATTTGCAATG GCTTTTATGT CTTTACAGCT TGGATATTTA
AACCTACTTC CTATTCCAGT TCTTGATGGC GGATTAATAT TTATTCTTTT AATAGAAAGT
ATTATCAGAA GACCACTTCC AGAAAAGGCA AAAGAATATT TAGCATACAT AGGCTTTGCG
CTTCTTGGTA GTTTAATGAT ATACGTCATT TTTAATGATA TATTAAGAGC TATACAATAA
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| Protein sequence | MTILAFLIML GVLITIHEFG HFLFARMFGV KVETFSIGFG PPIFRWKGKE TEYQIALIPL
GGYVKMYGED SMTEPVQGEV NKEAYNDPRS FHSKARWQKM LIAFAGPLFN IILAIVLFIA
VYAIGIKEPA YLTQPPEIGY VEKNSIAEKI GLQPFDKILK VNGEEVKNWK DLTIKLAMKS
GKNIDIEFLR NGNVYKVSAT LPEDMTKDSF GISPIIEPKV GKVLPNTPAE EAGLKEGDII
IAVNGKPIRT WFEFVDFMSN LNEKRDINLL VKRDGKVISL TITPEYNQEL KKYTVGISPK
FEVKTIQYPI DQAIVKAFDK TKELTASIYK VVAGLFTGEV SFKTLGGPIS IAKFSGEALE
TGIATFLFAM AFMSLQLGYL NLLPIPVLDG GLIFILLIES IIRRPLPEKA KEYLAYIGFA
LLGSLMIYVI FNDILRAIQ
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