Gene SYO3AOP1_0889 details

Gene Information

• Locus tag: SYO3AOP1_0889
• Symbol: dnaK
• ID: 6331212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 923184
• End bp: 925037
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642657180
• Product: molecular chaperone DnaK
• Protein accession: YP_001931071
• Protein GI: 188996820
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000150558
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAG TAATAGGAAT AGACCTTGGA ACAACTAACT CTGTTGTTTC TGTAGTTATT 
GGTGGCGAAC CAGTTGTTAT TGCAAACCAA GAAGGATTTA GAACAACTCC ATCTATTGTA 
TCTTGGACAA AAGAAGGGGA GATTTTAGTA GGAGAGCCTG CAAAAAGAAG AGCGGTATTA 
GACCCCGAAA ACACAATTTA TGAATCTAAA AGATTTATTG GAAGAAAGTA TGATGAAGTA 
TTAAATGAGA TAAAAAACGT TCCTTATAAG GTAGTTGCGG ATGATAAAGG TGATGCTGCA 
TTTAACGTTC CTAACGCCGG TAGAATTGTA AGACCGGAAG AAGTAGGAGC ACAGGTTCTT 
AAAAAATTAA AAGAGGCGGC TGAGGCATAT CTTGGAGAAA AAGTGACAGA AGCTGTAATC 
ACAGTACCTG CCTACTTTAA CGAAAGACAA AGACAGGCAA CAAAAGACGC GGGCAAAATT 
GCCGGATTGG AAGTTAAAAG AATCATCAAC GAGCCAACAG CAGCGGCACT TGCGTATGGT 
CTTGATAAAA AATCAGATAT TAAAATTCTT GTTTATGACT TTGGTGGTGG TACATTTGAC 
GTTTCTATCC TTGAAGGCGG AGATGGTGTT ATTGAAGTAA AAGCATCAGA TGGTGATACT 
CACCTTGGTG GTTCTGACAT TGATGCAAGA ATCATAAATT GGCTAGTAGA CGAGTTTAAA 
AAAGAGCATG GTATTGATTT AAGAAATGAT AAAACAGCAT TCCAAAGATT AAAAGAAGCA 
GCTGAGCAAG CTAAGAAAGA GTTATCTTTC AAAATGGAAA CAGAAATCAA CTTACCATTT 
ATTACAATAG ACCCAAACAA CAACCAACCT TTACACCTAC AAAAGAAACT AACAAGAGCA 
AGACTTGAAG AAATGATAAA GGACCTTGTT GATAGAACTA TGGAAATTGT AAAAAGAACT 
CTTGAAGCGG CAAAATTAAC TCCATCAGAT ATAGATGAAG TTGTATTAGT TGGTGGTTCA 
ACAAGAATAC CATTGGTACA ACAAAAAATT AGAGAATTCT TTGGAAAAGA ACCAAACAAA 
TCAGTTAACC CTGATGAAGT TGTTGCTGTA GGTGCATCAA TCCAAGGTGC AGTATTAACC 
GGAGAAGTTA AAGATGTATT ATTAATTGAC GTAACACCAC TATCTCTTGG TATAGAAACA 
CTTGGTGGTG TAATGACAGT TTTAATACCA AGAAACACCC CTATACCAAC TAAAAAATGT 
GAAATGTTTA CAACAGCAGT TGACAACCAA ACAACTGTTG AAATTGCAGT ATACCAAGGT 
GAAAGAAGCA TCGCCAGAGA AAATAAATTG CTTGGTAGCT TTAGATTAAC TGATATTCCT 
CCAGCACCAA GAGGAGTTCC TCAAATAGAA GTGTGCTTTG ATATAGACGC AGATGGTATA 
CTACATGTTA CAGCTACAGA TAAGGCAACA GGTAGAGCAC AATCTATAAC AGTTACACCA 
TCAAGCGGAT TAACTAAGGA AGATATCGAA AAACTAATCG AAGAAGCTAA AAAACATGAA 
GAGGAAGACA AGAAGTTTAA AGAAACAATT GAATTAAGAA ACCAACTTGA TGCTTTAGTA 
TACAGCTTTG AAAAGGCATT CAATGAAAAC AAAGCTAAAT TTACACCAGA AGAGATTTCA 
GAAGCAGAGA ATACAATATC TGAAGCTAAA AAAGCTATTG AATCTAACGA TAGAACACAA 
ATTCAAACTG CATTAGATAA ATTACAAAAT GTTGCTAACA GATTGGCACA AAAACTTTAC 
GGACAAGGTG GTAGTGAATC TGGCGGAGAT GTAATAAATC CAGAAGTTCA TTAA 

 

Protein sequence

MGKVIGIDLG TTNSVVSVVI GGEPVVIANQ EGFRTTPSIV SWTKEGEILV GEPAKRRAVL 
DPENTIYESK RFIGRKYDEV LNEIKNVPYK VVADDKGDAA FNVPNAGRIV RPEEVGAQVL 
KKLKEAAEAY LGEKVTEAVI TVPAYFNERQ RQATKDAGKI AGLEVKRIIN EPTAAALAYG 
LDKKSDIKIL VYDFGGGTFD VSILEGGDGV IEVKASDGDT HLGGSDIDAR IINWLVDEFK 
KEHGIDLRND KTAFQRLKEA AEQAKKELSF KMETEINLPF ITIDPNNNQP LHLQKKLTRA 
RLEEMIKDLV DRTMEIVKRT LEAAKLTPSD IDEVVLVGGS TRIPLVQQKI REFFGKEPNK 
SVNPDEVVAV GASIQGAVLT GEVKDVLLID VTPLSLGIET LGGVMTVLIP RNTPIPTKKC 
EMFTTAVDNQ TTVEIAVYQG ERSIARENKL LGSFRLTDIP PAPRGVPQIE VCFDIDADGI 
LHVTATDKAT GRAQSITVTP SSGLTKEDIE KLIEEAKKHE EEDKKFKETI ELRNQLDALV 
YSFEKAFNEN KAKFTPEEIS EAENTISEAK KAIESNDRTQ IQTALDKLQN VANRLAQKLY 
GQGGSESGGD VINPEVH