| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0880 |
|---|
| Symbol | |
|---|
| ID | 6332756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 913378 |
|---|
| End bp | 913980 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657171 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_001931062 |
|---|
| Protein GI | 188996811 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000197478 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGC TAAAATATTT AGAAAGACCA AGCTTAAGCA TATGGGAAAA AATATTTTTC
ATTGATTTTA TGAAAGGTTT AAAAGTGACT TTTAAAAACT TATTGCAAAA AACAATTACA
ACTAAATATC CTTTTGAGAA ATTAACTCCT CCAAAAAGAT TTAGAGGTGT GCATGCTCAT
AGAGTAAAAG ATGGAAATGA ACCGCCATCT TTTAGCGTAT TAGAAAAATT TATGGATATT
GAAACAGGCG AAAGCAGATG TGTTGCCTGT TATATGTGTC AGCAAGCATG CCCGATGCCT
TCATTGTTTG TTATAGAGGC AGAGCAACTT CCTAACGGAA AGAAAAAAGT TAAAAAGTTT
GAAATGAATT TATTAAACTG TCTGTACTGT GGATTGTGTG TTGATGCATG TCCGGTAAAC
TGTTTGATTA TGACAGATAT ATATGAAATG GCACAGTATC AAAGAAAAAA TTGCGTAATT
CATATGGAAG ATATGAGCGA AAGAGGAAAA GATTTTGATA GAAGAAGATT AAAAGAACCA
GATAGAATAT GGATTAATGA CTCAGAAAGA ATTAAGTTAT GGGGGCAGGT CAAATGGAGT
TAA
|
|---|
| Protein sequence | MVKLKYLERP SLSIWEKIFF IDFMKGLKVT FKNLLQKTIT TKYPFEKLTP PKRFRGVHAH
RVKDGNEPPS FSVLEKFMDI ETGESRCVAC YMCQQACPMP SLFVIEAEQL PNGKKKVKKF
EMNLLNCLYC GLCVDACPVN CLIMTDIYEM AQYQRKNCVI HMEDMSERGK DFDRRRLKEP
DRIWINDSER IKLWGQVKWS
|
|---|
| |