| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0875 |
|---|
| Symbol | |
|---|
| ID | 6332443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 907607 |
|---|
| End bp | 909076 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642657166 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| Protein accession | YP_001931057 |
|---|
| Protein GI | 188996806 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000367374 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCG TTCAGCAAAT CGTGTCAGGT TTTGGAGTTC CAAATTTTAA TGTTTTACTT
CCCGAAATGA TTGTTTTAGC AACTGCTATA TTAGTTTTTG TTTTAGAATT ATTTACAAAA
AATAGAAACA TTCTTCTTAT AACTTCAGTA TTAGGTCTTT CCTTAGCAAC TTTATCTACG
CTGACCATTA CAGAAGGCGC AGTCACTCTT TATGGATTAT ATATTGTAGA CAGTTTTTCA
TTAGTATTTA AATTTTTCTT ACTGATTTCA ACCATTTTGA TTGTCATCAA CCTACAATCT
TATGTCGATA GTAAGAAAAC ATCTTACGGT GAATACTATT ACCTAATTCT ATTTTCACTA
CTTGGAATAA TGATAATGGT TTCTTCTCCA AACCTTGTAA GCTTCTATAT TGGTTTAGAG
TTAATGTCTG TCTCTATATA CATTTTAGTT GGTCTTTGGA GGAAGGATTA TAAATCTAAG
GAAGGTGCAT TCAAATATTT AATCATTGGT GGTGCAGGTA CTGCTGTAAT TAGTTATGCA
ATTGCACTTT TATATGGAAA AACCGGAAGT TTTGATTTTG CAAGAATATT TAATGAAGTT
CAGGATAAAG CTGATATAGG TTTAACAGCT GGTTTAGTAC TTTTAATTTT AGGTCTTGCA
TTAAAAGCAT CTGCTGTACC ACTTCATTTC TGGACGCCTG ACGCTTACGA AGCTGCACCA
ACGCCAATTA CTGCATTTCT TGCAAGTATT TCAAAAGTTG CAACGTATGC ATTAATTTTA
AGAGTTATGG TGGAAGCTTT TCCGCTTGTT AACAGTATAT GGTCTTATGC ATGGGCAATT
TTAGCTGCAG CTTCAATGAT CGTTGGAAAT ATCATCGCTT TAAGACAGAA AAATGTTAAA
AGAATGCTTG CATATTCTTC CATTGCACAT ACGGGGTACA TCTTAGCTGC CTTAGCTTCC
CCAAATGGAA TGGGCTTTAC AGCTTTAATA TTTTATTCTT TAGTGTATAT GTTCATGGCA
ATTGGTGGAT TTATATTCTT GTCAGCTTTT GAAAAAGACA GCAGATGGAC TAATGACATT
GATAATTTTA AAGGTCTTGC AAAAAAACAT CCAATAATGG CGTTATTCAT GCTTATTTAT
ATGTTTTCTA TGCTTGGAAT TCCACCAACA GTTGGTTTTA TGGGTAAATT TGGTGTATTT
ATGGCTTTAA TATCATCAAA TGTTTGGTGG CTTGCGGTAG TTCTTGTTAT TACAAGCGTA
ATATCAGCTG GATATTACTT AAGAGTTGTT GCTTATATGT ATATGTATGA ACCTGTAATA
GAAGGGAGAT TTAATTTAAC GGTTTCTGAG AAGTTCACTG TTGGATTTCT CGCAATAGTT
GTTCTAATGC TTGGAATTTA TCCAACAGTA TTTTGGGAAA TTTCTAATAT ATTAACATCA
ATACTTGTTA TGAATGTGGG AGTTAGATGA
|
|---|
| Protein sequence | MTIVQQIVSG FGVPNFNVLL PEMIVLATAI LVFVLELFTK NRNILLITSV LGLSLATLST
LTITEGAVTL YGLYIVDSFS LVFKFFLLIS TILIVINLQS YVDSKKTSYG EYYYLILFSL
LGIMIMVSSP NLVSFYIGLE LMSVSIYILV GLWRKDYKSK EGAFKYLIIG GAGTAVISYA
IALLYGKTGS FDFARIFNEV QDKADIGLTA GLVLLILGLA LKASAVPLHF WTPDAYEAAP
TPITAFLASI SKVATYALIL RVMVEAFPLV NSIWSYAWAI LAAASMIVGN IIALRQKNVK
RMLAYSSIAH TGYILAALAS PNGMGFTALI FYSLVYMFMA IGGFIFLSAF EKDSRWTNDI
DNFKGLAKKH PIMALFMLIY MFSMLGIPPT VGFMGKFGVF MALISSNVWW LAVVLVITSV
ISAGYYLRVV AYMYMYEPVI EGRFNLTVSE KFTVGFLAIV VLMLGIYPTV FWEISNILTS
ILVMNVGVR
|
|---|
| |