| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0831 |
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| Symbol | |
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| ID | 6332351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 870606 |
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| End bp | 871724 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657127 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001931018 |
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| Protein GI | 188996767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0273609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTCTTAAT TTTTGCGATT TTTTTTGTAT CAACAGCTTT ACTTTACTTC
TATAACAAAA ACAAAAACGG ATATGAAACT TATAAGCTTG AGAAAAAAGA GGTTGTTAAA
TCTATTTATG CTTCCGGATA TATAGATAGT GAAAATAGCG TAATAGTTAA ATCAGAAGTT
TCTGGCTACG TTGAAAAAAT ATATGTAAAG GAAAACGACC AAGTAAAGAA AGGTCAAATC
ATTGCGAAAA TATCAAATCC TACACTTTAT GAAAATCTAA AAGATATAGA GTTTCAAGCA
CAGCTTGTCA AACAAAAACT TTCTGAAAAT TCAGATTTTA GAAAGCAGTT TATCGAAAAT
ATAGAAATGA AAAAAGCAAA CTATGAAAAT CTTTTAAAGG TTTACGAGAG AAGAAAAAAT
CTATTTGAAA AAGGGTTGAT CCCAAAAGAG CAGTTTGATG AGGTAGCTAA AAATTTAGAA
GTAGCCAAGA GAGATTATGA GAAAGCGGTT GCAAGCTATC AAGATAGTTT AAAAGAGTTG
TCTTATCAGC TAAAAAGCTT TGAAGCTAAA AAGGCGGAAG TAGCCAAAGA GATTGATAAA
TACTATATAA AATCTCCGAC AGATGGCAAA GTTTTAAGAA AATTTGTAAA TGAAGGAGAC
TATATAAACA ATATCTCTCA AAATAATCAG CTTTTTGCTA TTGGAAGTTT AGATAAGAGA
GAGACGGTTT TATTGGTAGA TGAAGAGTAT GCACCACTGC TTAAAGAAGG AATGGAAGTT
CTCGTAAAGC TTGATTCTTA TCCGGATAAA GTTTTCACCG GAAAAATCAA AACGATAGAG
TCTCAATCTG ACAAAAATTC AAGGACGGTC AAAGTTAAAG CAGATGTTAA CTATGACAGA
CCTGTATTGT TAAACATGAC GGTAGAATCT AATATAATTT TAGGAAAGGT TTCTGGCTTG
TTTATTCCAG AAAATGCTTA TAAAAATGGC TATGTCAAAT TGTTAGAAAA TGGAGAAATC
AAGAATGTTA AAGTAGAAGT TGATAAAGAA AAATATAATG GTTATCTAAA AGCTTTAAGT
GGTTTAAACG AAGGTCAAAT CATAGTTATT GGTAAATAA
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| Protein sequence | MKKIFLIFAI FFVSTALLYF YNKNKNGYET YKLEKKEVVK SIYASGYIDS ENSVIVKSEV
SGYVEKIYVK ENDQVKKGQI IAKISNPTLY ENLKDIEFQA QLVKQKLSEN SDFRKQFIEN
IEMKKANYEN LLKVYERRKN LFEKGLIPKE QFDEVAKNLE VAKRDYEKAV ASYQDSLKEL
SYQLKSFEAK KAEVAKEIDK YYIKSPTDGK VLRKFVNEGD YINNISQNNQ LFAIGSLDKR
ETVLLVDEEY APLLKEGMEV LVKLDSYPDK VFTGKIKTIE SQSDKNSRTV KVKADVNYDR
PVLLNMTVES NIILGKVSGL FIPENAYKNG YVKLLENGEI KNVKVEVDKE KYNGYLKALS
GLNEGQIIVI GK
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