Gene SYO3AOP1_0829 details

Gene Information

• Locus tag: SYO3AOP1_0829
• ID: 6332278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 867858
• End bp: 868394
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642657125
• Product: ATP-dependent protease peptidase subunit
• Protein accession: YP_001931016
• Protein GI: 188996765
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000238243
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TTAAAAGTAC AACAATATTA GCTGTTAGAA GAAACGGAAA AACAGTTATA 
GCCGGAGATG GTCAAGTAAC TCTTGGGTCT GCTGTTGTTA AGCATACAGC AAAAAAGATA 
AGAGTTTTAA ATGAAGGTAA AGTTATAGTT GGTTTTGCAG GCAGTGCTGC AGATGGTCTC 
GCATTGATGG AAAGGTTAGA AGAAAAACTA AACAAGTATA AAGGAAATTT AGTCAAATCT 
GCAGTAGAGC TGGCAAAAGA CTGGAGATTA GATAAATATC TAAGAAGATT AGAAGCTGTA 
ATGATAGCTG CAGATAAAAA TAATATGCTT TTACTCTCTG GAAATGGTGA TGTGATAGAA 
CCTGATGAGC CTGTTTTGGC TATAGGTTCT GGTGGAGATT ATGCAAGGTC TGCTGCGTTG 
GCGCTCTATA GAAATACAGA TCTTGATGCT CGCAAAATCG TAGAAGAGGC GATGAAGATA 
GCCGGGGAAA TCTGCATTTA CACCAACCAA AACTTTGTAA TAGAAGAAAT TGAATGA 

 

Protein sequence

MEKIKSTTIL AVRRNGKTVI AGDGQVTLGS AVVKHTAKKI RVLNEGKVIV GFAGSAADGL 
ALMERLEEKL NKYKGNLVKS AVELAKDWRL DKYLRRLEAV MIAADKNNML LLSGNGDVIE 
PDEPVLAIGS GGDYARSAAL ALYRNTDLDA RKIVEEAMKI AGEICIYTNQ NFVIEEIE