| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0818 |
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| Symbol | gatB |
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| ID | 6332428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 856734 |
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| End bp | 858182 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657114 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001931005 |
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| Protein GI | 188996754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.295069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTCAG CAGTATTGAT TGATAAAGAG TTTGACGTTG TTATAGGGCT TGAAACCCAT
GTTCAAATGA ACACTCAAAC AAAAATGTTT TGTGGATGTA AAGTTGAGTT TGGGGCTGAG
CCTAACACTA ACGTATGCCC AGTTTGCTTA GCACATCCAG GGACGCTGCC GGTGATAAAC
AAAAGAGCCA TAGAGTTTGC CATAAAAGCA GCTTTGGCGT TAAACTGCAA AGTTCATAAC
CTTTCTATCA TGGCAAGAAA AAATTATTTT TATCCAGACC TTCCAAAAGG TTATCAGATT
TCCCAGTATG ACAAACCACT TGCAACAGAT GGATACATAG AAATCAAAAC AGAAAACGGA
TTTAAAAAAA TAAGAATTCA TAGATTACAC ATAGAAGAAG ACGCAGGAAA AACAATACAC
GAGGGGAGTT TTTCTTATGT AGATTTAAAC AGAGCAGGTA CTCCACTGAT GGAAATCGTC
ACTGAGCCGG ATATATCCTC TGCAGAAGAA GCAAGAAAAT ACTTAGAAAA ATTAAGAAAC
ATCATGAGAT ATCTTGGTGT ATCTGATGCA GACATGGAAA AAGGACAGCT TAGATGTGAT
GTAAATATAT CCTTAAAACC AAAAGGTTCT GAAAAGCTTG GCACAAAGGT AGAGCTTAAA
AATATTAACT CATTTAGATT TATCGTAAAA GCAATAGAGT ATGAGATAGA AAGACAGTCT
AAACTTCTCA AAAAAGGAGA AAAAATAGTT CAAGAGACAA GATTGTTTGA CCCAAATACC
GGAAAAACCT ACACCATGAG AACAAAAGAA GAAGCACACG ATTACAGATA CTTCCCAGAC
CCAGATTTAC TCCCGGTAGT AATAAAAGAT GAAGAAATCC AGCAGATTAA AAACTCACTT
CCAGAACTTC CAGACCAAAA ATATCACAGA TACATCGAAA AGCTTGGACT TCCTGAATAT
GACGCAGAAG TGTTAACATC CGATAAAGCC TTAGCAAACT ATTTTGAAAA AGTAATAGAA
ATCTTTCCAC AAAATCCAAA GCTTGTAGCA AATTGGATAC TAAACGAGCT TCTCGGAAAG
CTAAACGAAA AAGGATTAGA AATAGAAAAT TCTCCTATTT CTCCAAACTC TTTGGCAGAG
CTTTTATCGT TAATTACTGA TGGCACAATC TCAGGAAAGA TTGCAAAAGA TGTGTTTGAA
ATAGCATTTG AGACACAAAA ATCACCAAAA CAGATAGTGG AAGAAAAAGG ATTAAAACAA
ATTTCAAACG AAGATGAAAT AAGAAAAATA GTAAAAGACA TTCTTGCTAA ATTCCCGGCA
GAAGTAGAAA AATATAAATC AGGAAATGAA AAAATTCTCG GATTTTTAGT CGGACAGATA
ATGAAAGAAA CAAAAGGAAA AGCAAACCCT CAGCTTGTAA ATAAAATCAT AAAAGAGGAG
CTACAATGA
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| Protein sequence | MESAVLIDKE FDVVIGLETH VQMNTQTKMF CGCKVEFGAE PNTNVCPVCL AHPGTLPVIN
KRAIEFAIKA ALALNCKVHN LSIMARKNYF YPDLPKGYQI SQYDKPLATD GYIEIKTENG
FKKIRIHRLH IEEDAGKTIH EGSFSYVDLN RAGTPLMEIV TEPDISSAEE ARKYLEKLRN
IMRYLGVSDA DMEKGQLRCD VNISLKPKGS EKLGTKVELK NINSFRFIVK AIEYEIERQS
KLLKKGEKIV QETRLFDPNT GKTYTMRTKE EAHDYRYFPD PDLLPVVIKD EEIQQIKNSL
PELPDQKYHR YIEKLGLPEY DAEVLTSDKA LANYFEKVIE IFPQNPKLVA NWILNELLGK
LNEKGLEIEN SPISPNSLAE LLSLITDGTI SGKIAKDVFE IAFETQKSPK QIVEEKGLKQ
ISNEDEIRKI VKDILAKFPA EVEKYKSGNE KILGFLVGQI MKETKGKANP QLVNKIIKEE
LQ
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