| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0816 |
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| Symbol | |
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| ID | 6332426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 854848 |
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| End bp | 855540 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657112 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001931003 |
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| Protein GI | 188996752 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000900984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATAA AAGAAAATGT GTTAAAAATT GAAGAAAGGA TACAAAAAGC TTGTGATAAA
GTTGGAAGAA AGAGAGAAGA AGTCATTCTT CTTGCAGCAT CTAAGACACA GCCGGTAGAA
AAAATTATAG AAGCTTACGA GTCAGGTATT AGATACTTTG GAGAGAATAA AGTACAAGAA
GGCATTGAAA AAATAGAAAA ACTTAAAGAA TATGCAGATA TACATTGGCA TCTAATAGGT
GGTCTTCAAA CCAATAAAGT TAAGTATGCT GTAAAATACT ATGAATTGAT TCATTCAGTT
GATAGACAAG CTCTTGTTGA TGAGATTGAA AAAAGAGGAG AAAAACTAAA CAAAGTTATA
GATGGACTTA TTGAAGTTAA CTTTGGAGAA GAGTCAAAAT TTGGCGTTAA AAAAGATAAT
TTAAAAGAAT TATTCGAGTA TATTCTTACA AAAAAATATA TAAAAATTCA TGGATTAATG
GCTATTCCAC CATACTTTGA AAATCCTGAA GATGTTAGAC CATATTTTAT CAAACTACGG
ACATTGAGAG ACAATCTTGA AAAAGAGTAT AATGTAAAAC TGTCTCATCT TTCTATGGGA
ATGTCTCATG ATTTTGAAGT TGCAATAGAG GAAGGTGCTA CAATAGTTAG AATAGGAACA
GCAATATTTG GAGAGAGAAA TTATGCTAAA TAA
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| Protein sequence | MSIKENVLKI EERIQKACDK VGRKREEVIL LAASKTQPVE KIIEAYESGI RYFGENKVQE
GIEKIEKLKE YADIHWHLIG GLQTNKVKYA VKYYELIHSV DRQALVDEIE KRGEKLNKVI
DGLIEVNFGE ESKFGVKKDN LKELFEYILT KKYIKIHGLM AIPPYFENPE DVRPYFIKLR
TLRDNLEKEY NVKLSHLSMG MSHDFEVAIE EGATIVRIGT AIFGERNYAK
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