| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0814 |
|---|
| Symbol | |
|---|
| ID | 6332424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 853906 |
|---|
| End bp | 854685 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642657110 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_001931001 |
|---|
| Protein GI | 188996750 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000421661 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGAAT TAATAAAAAG AGTAATATCT GCCGTAGTCT TAGCATCTAT TACAATCGGC
GGGATCATTT ATCTACCTGC ACAAGCTTTA AAGATAGTCA TAACTTTATT AACAGTTGTA
GTAAGTTATG AAGCCTTTAA TCTCATTGGA AAGAAATATC CGGAGTTAAA GCATCCAATA
GTATTTATAA TGGCTTTTTT ATCATCTTTA TCTTTACTTT TCATTGATAC ATATTTATCT
ATATTAATTA TATTTCTGTT TAGCTTTTAT GTAGCATCTA AAAAATGGGA TTTAAATTAT
TTAGCAATTA CTATTTTTGG ACTGTCTTAC AGTGTATTTT TTGTTTCATC CCTTGGTTTG
TTAGTCGATT ATAATAAGTA TTTGTTATTT TTACTTTTTG CCGTTGTTTG GACCGGTGAT
ACACTTGCAT ACTTTGTTGG AAAAAATTTT GGAAAGCACA AACTTTCACC AAGAATATCT
CCCAAGAAAA CTGTAGAAGG TGCTGTTGGC AGTTTTTTAG GCTCTTTGCT TGGAGGTTAT
TTGGTTATTA AGTATCTTGG TTTTGACATA AAATTTATGA TTCCTGTGAT AATTTCTGCT
GTTATTCTTC AGATTGGAGA CTTATTTGAA AGCTTCATCA AAAGGCAGGT TAACGAAAAA
GATTCTTCTA ATTTAATTCC GGGTCATGGG GGAGTTTTAG ACAGGATAGA CTCTCTTATA
TTTGCATCGG TTGTATTTTT AATTTGGATA AAGGTTATAC ATGCGTTTAA TTTAGGTTAA
|
|---|
| Protein sequence | MSELIKRVIS AVVLASITIG GIIYLPAQAL KIVITLLTVV VSYEAFNLIG KKYPELKHPI
VFIMAFLSSL SLLFIDTYLS ILIIFLFSFY VASKKWDLNY LAITIFGLSY SVFFVSSLGL
LVDYNKYLLF LLFAVVWTGD TLAYFVGKNF GKHKLSPRIS PKKTVEGAVG SFLGSLLGGY
LVIKYLGFDI KFMIPVIISA VILQIGDLFE SFIKRQVNEK DSSNLIPGHG GVLDRIDSLI
FASVVFLIWI KVIHAFNLG
|
|---|
| |