Gene SYO3AOP1_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0786 
Symbol 
ID6331842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp817716 
End bp818603 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content32% 
IMG OID642657076 
Productband 7 protein 
Protein accessionYP_001930973 
Protein GI188996722 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATT TAATTATTTT TATTATTTTT GCTGTTGTAA TGTTTCTATC GATCGTTGGA 
ATTAATAAAG TTGTATTAAT AATACAAAGT TTGGGAGGTG TTTTTGCTAT GGCTGGATTT
ATACCTGTTT TAGTTGTATT AGCCATTATC TTTTTGGCAA CTTCAGTCAG AATAATTAAT
GAGTATGAAA GGGCTGTTGT TTTTAGACTT GGTAGAGTTT TAGGAAGACC AAAAGGTCCG
GGAATGTTTA TTTTAATTCC TTTCATTGAT AAGATGGTTA AAGTGGATTT AAGGGTTGTT
ACTATGGATG TTCCACCACA GGATGTAATA ACAAAAGATA ACATATCTGT ACAAGTGGAC
GCAGTTGTCT ATTTTAAAGT TGTAGACCCT ATCAAAGCCG TTATAAATGT AGAAAATTAT
TTTTATGCAG TATCTAAAAT ATCTCAAACT ACATTAAGAA GTATATGCGG TCAAGCTGAG
TTTGATGAGC TTTTATCTCA AAGAGAAAAA ATTAATTCAA AACTTCAGGA AATAATAGAC
CAAGAAACAG ACCAATGGGG AATTAAAGTT ATAACTGTTG AATTAAAAAG AATAGACATT
CCAGAGGAAC TAAAAAGAGC AATTGCAAGA CAAGCAGAGG CAGAAAGAGA AAGAAGGGCA
AAAGTCATTC AAGCGGAGGC AGAATATCAA GCAGCGCAAA AGCTTACAGA AGCTGCAGAA
ATGCTTGCTA AACAGCCAAT AGCATTGCAG TTAAGATATT TAGAAACATT ATCAACAGTT
GGTCAATACA ACTCCAATAC TATAGTTTTA CCACTACCTA TGGAATTATT TGAAATATTT
AAAAATTCTA AAATTAACAA ATCTGAAGAA AAACGAGAAA GTGAATAA
 
Protein sequence
MKDLIIFIIF AVVMFLSIVG INKVVLIIQS LGGVFAMAGF IPVLVVLAII FLATSVRIIN 
EYERAVVFRL GRVLGRPKGP GMFILIPFID KMVKVDLRVV TMDVPPQDVI TKDNISVQVD
AVVYFKVVDP IKAVINVENY FYAVSKISQT TLRSICGQAE FDELLSQREK INSKLQEIID
QETDQWGIKV ITVELKRIDI PEELKRAIAR QAEAERERRA KVIQAEAEYQ AAQKLTEAAE
MLAKQPIALQ LRYLETLSTV GQYNSNTIVL PLPMELFEIF KNSKINKSEE KRESE