| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0772 |
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| Symbol | |
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| ID | 6331452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 806305 |
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| End bp | 807366 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657062 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001930959 |
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| Protein GI | 188996708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000602446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTTA GAAAAGCTTC AATAATGATT TTACTTTTAT CACTATTTAC TCTATCAAAC
GCTCAGGAGA TTATACTTAA ACCAGAGATT GGAAAAAAGA TAAATCTAAA ATCCGAAAAA
GTGAAAAAAG GTGAGGTGGC AGAGTATCAA ACATTTCCAG CAGTGGTAAA TGAAGACCCA
ACATTAAGCT TTGCCGTTTC ATCTCCTGTG GAAGGAATAG CTGAAAGGGT TTATGTTAAG
CTTGGAGACC ATGTAAAAAA AGGTCAGATA TTGCTAACTG TTTATTCTCC AACGATTGCA
AACTTGCAAG CAAATATCGA AATGGCAAAG GTTAAATTCC AAACAGCCAA GCAGGTATTA
GAAAGAGAAG AAAATCTTTA TAAAGAAGAA GTTATACCGT TTGCAAGATA TCAAACAGCA
AAAATTGAAT ATGAAAAAAG TCTTGGAGAG TATCAAGCAT TGAAAAAAGC TCTAAGCTCT
TATGGAGAAG TCAAAGGAAA TTCTATTCTT TTAAGAAGTA AAGTTAACGG ATTTGTTGCT
GATATTAAAG TAATAAATGG TAACCCTGTA AATGTTGGTG AAGAACTTAT GAGAATCCAT
TCTCATGAGA GACTTTGGGT AATTGCTCAG GTGCCTTTTG AAATTACAAA AGATTTAAAA
ATTGGTCAAA AAGTTATTGT AATATCCCCG CTAAATAAAG AAATCATCGG AACGTTAAGT
CTTATAAGTC ATGAGATTGA CCCAAAAACA AGAAGAAATG ATATAAGAAT AGTTGTCAAT
AATGTAGAAG ATTTTCTTAA ACCTAATCTT TTTGTAAATG TAAAATTACC GCTTAAATCA
ACCAACGGTG TTTTAGTTCC TTTAAAAGCT GTTTTTGAAG AAAAAAGCAT ATACTACTGC
TTTGTAAAAT CAGGCAATAA AGCCATTTTA AGAGAGGTTA AGATAGCTGA AAAGGTAGGA
GATTTTTATA AAGTTATTTC AGGACTAAAA GAAGGTGAAG AGGTTATCAC CGATGGTCTA
ATCTTTCTTA AAACTCAGGT TTTTGGGGGT GCCGGAGAAT GA
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| Protein sequence | MLVRKASIMI LLLSLFTLSN AQEIILKPEI GKKINLKSEK VKKGEVAEYQ TFPAVVNEDP
TLSFAVSSPV EGIAERVYVK LGDHVKKGQI LLTVYSPTIA NLQANIEMAK VKFQTAKQVL
EREENLYKEE VIPFARYQTA KIEYEKSLGE YQALKKALSS YGEVKGNSIL LRSKVNGFVA
DIKVINGNPV NVGEELMRIH SHERLWVIAQ VPFEITKDLK IGQKVIVISP LNKEIIGTLS
LISHEIDPKT RRNDIRIVVN NVEDFLKPNL FVNVKLPLKS TNGVLVPLKA VFEEKSIYYC
FVKSGNKAIL REVKIAEKVG DFYKVISGLK EGEEVITDGL IFLKTQVFGG AGE
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