| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0734 |
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| Symbol | |
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| ID | 6332147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 763450 |
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| End bp | 765660 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657024 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001930921 |
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| Protein GI | 188996670 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAGAA AAAAGGCTTT AGCACTTTTT TATGCTGCTA TGGTAAGTGG TAGTTTTGTT
TATGCACAAG AAACAACTTT AAAAGTTAAA GTCGAAGACC AAACAGGTTT AGAAAAAGAG
CTTCCGATTG AAATCAAGAA AAATGTACCG GCTACCGAAA CAACAGTAAA AAAAGAAGAG
ATTCAAACAA GAGCCGGAGC TGGTTCGGTT AACATCTTTA AGGCTATTGA ACTTACTCCA
TCTGTAAACG TTCAAACCGA TGATGCATAT GGACTTAGTG GTGGTAGTGT AAGAATAAGA
GGTTTTGACA ATACTCAAAT TGGAGTAACT ATTGATGACA TGCCACTAAA CGACTCAGGA
AACTTTGCCC TTTATCCTCA TGAGTATGCA GATGTGGAAA ATCTTGAGAC TATAACTATT
ACAAGAGGTT CTGTGAACAA AAGGTCTCCT TTCTATACAG AAATTGGCGG TGCTTTGAAG
GTTAGAACTG CTCCACCAAG AAGTAAATTT ACAAACTCAT TTGGTCTAAA ATTTGGTTCT
TATAACTTTA AAAGAGCATT TTACAGATTA GACACAGGAT ATTTATTTGG AAATAAAAGC
CTTCCAAAAA TATTCTTCTC TTATTCTCAT ACAGAAGTTG ATAAATGGAA AGGGCCTGGT
GGTGCACCTC AGTACAGAGA CCACTATACC TTAGGAATAG CAGAAACAAT CGGAATTCTT
GATTATGAAT TTTACTATGA CAGAAACGTT CAATTAAACT ATTTCTACAG ACCGTTTACA
TACGCAGAAA CCAAAGACGG AAATATTTTT AGAAGTAGAG ATTATACTAA TAAATTAATC
CCGGGTAATA CTGCCAATAA CACACAGTAC TATGAATTCT ACCAAAACCC TTATACAAAC
CAGCAATATA GAGCCATCTT TAATCTTAAC TTTACAGATA AGATATCCCT TAATTTTAAG
CCTTACATGT GGATTGGTAG AGGAAGCGGA ACGAGTGCAA CATCTTCTGG ATCTAATGTT
TTCTTTAGAG AATCTTTTAA CTATACAGAT AGACCAGGAT TTACAACCGA GTTAAAGGTG
GATTTACCGT ATAATTCTAA ATTTTTTTTA GGATACTGGT ATGAATACGC AGACTTAAAA
CAATGGCAAC CATCAAGATT GGTAAATATA AATTCAGATG GTACTTATAC ATTGAATAAT
TCTACATCTT TTAGATACAA CTATATTCAA AGAACAAAGA CAACAACAAA TACTCCTTAC
ATTTCATTTG AATCAAAAGA GCTTTTAGGT AAATTAGATT TTAACCTCGG TTTTAGATTT
GCAAGCATTA AAAGAAAGTT TAACGATTAT AGTACGACTG GACTGCCTTA TTATCCAGAG
GATGGTGTTT ACGACGACCC AAGATTAACC AAAAATCAAA CTACATCATA CGAAAAAACA
TACAAAAAAA CTTTACCTAA CATTGGATTA GGATTTAGCG TTTTAGACAA TCTATATCTT
TATGCTTCTT ATGCTAAGAA CTTTAGAGTA CCTCAGAATT TTTTGGGAAC TATACCGACA
AGCAGATCAG CGCAATTTGT AGCTGACCAA CTAAAGCCTG AAGAGTCTGA TAGCTATGAT
TTAGGTGCAA GATTAACTTA CGATAAATTT TACATTGCTC CAACTGCTTA TATTGTAAGA
TACAAAAACA GATTAATCAG AGTTGCTGAC CCAACTGACC CAAATTTACT ATACATTAGA
AACGCCGGAA AAGTTGATGC TAAAGGGTTT GAGTTAGAAG TGGGAGCAAA TCCTATGCCA
AAAACTAACA TTTACGCATC CTTCTCATAC AACGAAGCCA AATTTAAAGA CGATGTGTTT
TATGATGGAA ACACTAAATA TGACATTAAA GACAACAGCG TTCCAGACAC TCCAAGGTAT
ATGGTCAAAT TAGGTTCTCG TTTTAATCTA TACGATTTTA AAGTCTCTCC AAGCATCCAG
TTTATAGGTT CAAGATATGG TAATTTCACA AATACAGAAA AAGTTGATAA CTACGCAATT
GTAAACCTAT CGGCTACAAG AAAGATTTAT AAATACTTTG ACCTTTACAT GGACGTAGTC
AACTTAACAA ATCAAAAATA CGTAGGTAGA ATAAGTCCAG GGACAGCGTC AGGTACTTAC
TACGCAGGAA CACCGTTCAC TATATCTTTT GGAATCAACG GGAGGTTTTA A
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| Protein sequence | MKRKKALALF YAAMVSGSFV YAQETTLKVK VEDQTGLEKE LPIEIKKNVP ATETTVKKEE
IQTRAGAGSV NIFKAIELTP SVNVQTDDAY GLSGGSVRIR GFDNTQIGVT IDDMPLNDSG
NFALYPHEYA DVENLETITI TRGSVNKRSP FYTEIGGALK VRTAPPRSKF TNSFGLKFGS
YNFKRAFYRL DTGYLFGNKS LPKIFFSYSH TEVDKWKGPG GAPQYRDHYT LGIAETIGIL
DYEFYYDRNV QLNYFYRPFT YAETKDGNIF RSRDYTNKLI PGNTANNTQY YEFYQNPYTN
QQYRAIFNLN FTDKISLNFK PYMWIGRGSG TSATSSGSNV FFRESFNYTD RPGFTTELKV
DLPYNSKFFL GYWYEYADLK QWQPSRLVNI NSDGTYTLNN STSFRYNYIQ RTKTTTNTPY
ISFESKELLG KLDFNLGFRF ASIKRKFNDY STTGLPYYPE DGVYDDPRLT KNQTTSYEKT
YKKTLPNIGL GFSVLDNLYL YASYAKNFRV PQNFLGTIPT SRSAQFVADQ LKPEESDSYD
LGARLTYDKF YIAPTAYIVR YKNRLIRVAD PTDPNLLYIR NAGKVDAKGF ELEVGANPMP
KTNIYASFSY NEAKFKDDVF YDGNTKYDIK DNSVPDTPRY MVKLGSRFNL YDFKVSPSIQ
FIGSRYGNFT NTEKVDNYAI VNLSATRKIY KYFDLYMDVV NLTNQKYVGR ISPGTASGTY
YAGTPFTISF GINGRF
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