| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0730 |
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| Symbol | |
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| ID | 6332366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 759050 |
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| End bp | 760081 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657020 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001930917 |
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| Protein GI | 188996666 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTAG ATTTTGACAA CAGAGAAATT TCTCAAGCTT CCAGTGATGA GGATCATGAT
TTTACGCTTA AAACAATAGC TAATAAGACC CCTTTCATTT ATGGAGATAC AAATGCTTTG
GAAGCTTACT ACATTATTAT TCAGAATAGT ACAACTAATA TTATCCCTGT TGTAGACCAA
GATCTTAGAG TTATAGGACA GATACAAAGA ATCAGGTACA TAGAAAATAT TTATTTCGGT
AGGTTTGGTT ACGGTATATA TCTTAATGCT AAAAGGAGAA TAAAAGATAT CATGGAACAG
CCCGATATAA TTTTTGATGT AAATATTAAA GCAGAAAAAG TGGCATTAAA AATAAACAAT
AGAGAAGAAT TTAGAAAACA CGATGATATT ATAGTCGTTG AAGATAATAA ATATTATGGT
ACTGTTAAAG TTCATGACTT GATGGAGCTT TTAACTAAAA GAATGCTTCA ATTAGCAAGG
GATTTAAACC CTTTAACCGG TTTACCAGGG AACTGGGCTT TAAGAAAGTA TATTGAAGAA
AGACTAAAAA GGGAAGGTTC TTTTGATGTT ATTTATTTAG ATATTAATAA TTTTAAGCCT
TATAACGACC ACTACGGGTT CTTGTTGGGC GATAAAGTAA TTTTTATTAT TGGTGAGATT
TTAAAGAAAA TAAAAACAGA ATTTAATAAT GTTAAACCTT TCCACCTTGG TGGAGATGAT
TTTATAATAG TTGCACCATA CGAAGAAGGA GAGAAAATAT CAAGGTTAAT AATAGATAGA
TTTGAAACCT TTTTGCCAGA CCTTCACGAA AAAGATTTTG AAGTAGGTTT TTATAAATCC
ATAGATAGAG AAGGAAAAGT AAAAAATTTT CCTCTACTAT CTATAAGCTG TGCAATCGTC
CCCGTAAAAG AAAATTCAAT CAAAAATTTT GCACATTTAG CATCAGTGGC AGCAGAGATA
AAACACGCAG CAAAATCTTT AGCTAAATCT TCTGGAAAAT CTGCAATATT CGCTAACAGA
AGAAAAATAT AA
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| Protein sequence | MNLDFDNREI SQASSDEDHD FTLKTIANKT PFIYGDTNAL EAYYIIIQNS TTNIIPVVDQ
DLRVIGQIQR IRYIENIYFG RFGYGIYLNA KRRIKDIMEQ PDIIFDVNIK AEKVALKINN
REEFRKHDDI IVVEDNKYYG TVKVHDLMEL LTKRMLQLAR DLNPLTGLPG NWALRKYIEE
RLKREGSFDV IYLDINNFKP YNDHYGFLLG DKVIFIIGEI LKKIKTEFNN VKPFHLGGDD
FIIVAPYEEG EKISRLIIDR FETFLPDLHE KDFEVGFYKS IDREGKVKNF PLLSISCAIV
PVKENSIKNF AHLASVAAEI KHAAKSLAKS SGKSAIFANR RKI
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