| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0709 |
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| Symbol | |
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| ID | 6331660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 730271 |
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| End bp | 732214 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642656997 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001930899 |
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| Protein GI | 188996648 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01577] oligosaccharide amylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA TAGTGCTGAG TAATGGAAAA TTTTTTGTTA ATATAGATAA AAACTTTGCT
ATTAGAGACT TTTACTTTCC TTACATTGGA ATGTATAATC ATTTAAACTC AGAGGCAAAC
TCTATTGGTG TATACGTAAA CGGTAGGTTT AAATGGATTG ATGACTCTTG GGAGAAAAAA
TTTAGCTACT GTGAAAACTC ATTAGTTGCG AATTTAGAAG CTAAATCTGA TGAGCTTGGC
ATCAAACTAA ACTTTAAATC AGCTATTCAT AAATATTCAG ATATATTAAT CCATCAAATC
CAGATTACAA ATCTAACAGA GGAAGAAAAG GAAGTAAAAA TATTTTTTTA TCATGGATTT
AAATTAAATG AATCTGAAAT TGGTAATACT GCATACTACG ACCCAAAATT AAAAGGTTTG
ATTCATTACA AAGGCGCAAC GTATATTTAT ATCTCGTCTC AAAGTAGCAA TTTTGAATAT
ACCGTCTCAA AGAAAAATCA TACATCCGGC TCTTGGTTAG AGATTGAAAG AGGTCATTTA
AGCAGAAATA AGATAGTTCA AGGAGAGATT GATAGTGCTT GGGCAATAGT TGAAAATCTA
AAACCTTTGG AAAATAAAAC AGTTTACTAC TATCTTTTAG TTGGTCATCG TTATGATGAT
ATAGTTAAAT TGAAAAATAA AGTAAGCAAT GAAGGATTAC AGCATTTACT TGAAGAGACA
CAAGAGTTTT GGCAAGGTTG GATAAAGACA AAAGACAGGC TACTACCAGC TTTATCTAAA
AATATAAAAG ACTTATATTA TCAAAGTCTT TTAATCATTC GTGCTCACTT TGACAATAAC
GGTGCTATCG TTGCCGCAAA TGATACATCA ATTTATAAAT TCAACAAAGA CCATTACAGC
TATCTTTGGC CAAGGGATGG TGCTTTTATT GTTATGTCTC TTGATAATGC AGGATATACA
AACTTAACAC AAAGATTTTT TAAATTCTGT AAACAGCATA TAACAGATGA AGGATTTCTT
CTTCATAAAT ATTCTCCAGA TGGAACAGCA GGTTCATCAT GGCATCCTTG GTGTGACGAT
GATGAAAATT ATCAGCTTCC AATCCAAGAA GATGAGACAG CTTTAGTGGT GGTTGCTTTA
TACAATCATT ATTTAAATAG CAAAGATATT GAGTTTGTGG ACTATATGTA TAACGGATTT
GTCAGAAAGG CTGCAAACTT TATGGTTAAA TATACAGACC CACAGTTAAA CCTTCCCCTT
GAAAGCTATG ATTTATGGGA AGAAAGAAGA GGTATTTTTA CTTATACAAC ATCAACAGTA
TACGCAGGTT TAATTGCTGC ATCCAAGCTT GCTATACTTG TAGGAAATAA AGAAGAGTCT
GTTTTGTACA ATCAAAAAGC TGAAGAAATC AGAAATGGAA TTTTGACACA TCTTTATGAT
GAAGAAGAAG GAAGATTTTT AAGAGGAATA TACAGAGATA AAAACGGAAA TATCATTAAG
GATAAAACTG TAGAAAGTAG TTTGCTTCTT GTTCATGAAT TTGGCGTGAT AGACCCAGAA
GATTATAGAA TGGTTAATAC TGTAAGGACA GTAGAGGATA GGCTTTGGAT AAAAAATGGG
ATTGGTGGTC TTGCAAGATA TGAAAACGAT TACTATCACA AAGTGTCTGA TGATACACCA
GGAAATCCTT GGATAATAAC TACTTTATGG CTTGCTAACT GGTATACGCA GGTTGGATTG
TTTGATAGAG CATTTCAGCT GATTAACTGG GTGATAAAGA GAAAAACTCA GGCTGGATTG
TTGGCAGAGC AGTTCCATCC ATTCACAGGA GAGCCGTTAT CTGTATGTCC TTTAACATGG
TCTCATTCTT CGTTTTGCTA TTCAATACAA AAATTGAATA AGAGATTGAT TGAAGACAAA
ACACCAGATT ATGTGATGGC TTAA
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| Protein sequence | MKEIVLSNGK FFVNIDKNFA IRDFYFPYIG MYNHLNSEAN SIGVYVNGRF KWIDDSWEKK
FSYCENSLVA NLEAKSDELG IKLNFKSAIH KYSDILIHQI QITNLTEEEK EVKIFFYHGF
KLNESEIGNT AYYDPKLKGL IHYKGATYIY ISSQSSNFEY TVSKKNHTSG SWLEIERGHL
SRNKIVQGEI DSAWAIVENL KPLENKTVYY YLLVGHRYDD IVKLKNKVSN EGLQHLLEET
QEFWQGWIKT KDRLLPALSK NIKDLYYQSL LIIRAHFDNN GAIVAANDTS IYKFNKDHYS
YLWPRDGAFI VMSLDNAGYT NLTQRFFKFC KQHITDEGFL LHKYSPDGTA GSSWHPWCDD
DENYQLPIQE DETALVVVAL YNHYLNSKDI EFVDYMYNGF VRKAANFMVK YTDPQLNLPL
ESYDLWEERR GIFTYTTSTV YAGLIAASKL AILVGNKEES VLYNQKAEEI RNGILTHLYD
EEEGRFLRGI YRDKNGNIIK DKTVESSLLL VHEFGVIDPE DYRMVNTVRT VEDRLWIKNG
IGGLARYEND YYHKVSDDTP GNPWIITTLW LANWYTQVGL FDRAFQLINW VIKRKTQAGL
LAEQFHPFTG EPLSVCPLTW SHSSFCYSIQ KLNKRLIEDK TPDYVMA
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