| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0704 |
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| Symbol | |
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| ID | 6332293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 724968 |
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| End bp | 727565 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656992 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001930894 |
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| Protein GI | 188996643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.795681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA ATGAAGTTTC TAAAGAAGAG GTTTTTTCAT TACTTAAGAC CTCGGAAAAA
GGTCTTACAG AAAAAGAAGC TAAAAAGCGA CTTTCTCAAT ATGGATATAA TGAAATTGAG
GAAGTTAAAA AATCTCCTAT CATTTTTAAG TTTTTACGTC AGTTTACTCA TTTTTTTGCA
ATCATTTTAT GGGTTGCTGC AGGCTTAGCA TTCCTTTCAG ATTTAATTAA TCCTGCGGAA
GAAATGAAAA GTCTTGGTTT TGCGATAATT TTGGTTATTG TTATAAACGC TGTCTTTGCT
TTTATTCAAG AGTATAAAGC TGAAAAATCT ATTGAAAAGC TTAGACTTTT GGTTCCTCGC
CGTTGTAGAG TGATAAGAGA TGGTATTGAA AAAGAAATCT CTGCAACGGA GCTTGTTCCA
GGAGACATAA TTATTCTTTC AGAAGGAGAT AAAGTTCCGG CAGATGCAAG GGTTATAGAG
TCAAATTCTC TCACAGTAAA TAATGCACCT CTTACAGGAG AATCTATTCC TATAGTTCTT
ACATGTAAAC CTTTCTTTGG AGAATTAATC AAGAGCAATA ATGTAGCTTT TGCTGGAAGT
ATGGTTATTT CAGGAAGTGG TAAAGCGGTT GTTTTTGCAA CCGGCATGAA TACTGAGTTT
GGAAAAATTG CACATCTTAC GCAAACTGTT CAAGCTGAAG AAACACCGCT TCAAAAAGAA
ATCACAAAAA CATCAAAAAT CATAGCCTTA GTTGCTATTT CAATAGGAAT TATCTTTTTT
GTTATCGGTA GTTTTATTGG AAGGAATTTT ACTGAAAACT TTATTTTTGC GATTGGTGTT
ATAGTTGCTT TGGTTCCTGA AGGGATGCTT CCAACCGTAA CACTTTCGCT TGCTATAGGA
AGTCAAAGAA TGTTAAGAAG AAATGCTCTT GTTAAAACAT TGACAGCAGT AGAAGCTTTA
GGGAGTATAA CTGTTATATG CACTGATAAA ACAGGTACTA TAACACAAAA TAAAATGGCT
GTTAAAGATG TTTGGATATT TGATGAAAGT TCAAAAGATA TGTTAATGAA AATTGCTTAT
CTTTGCAATA ATGCTGAGAT TGTAAATAAT GAATATAAAG GAGATCCAAC AGAAGTTGCT
CTATTGAAAT ACGTTAGAGA AAAGTATGGG GATATTAATG CAGAAAGGTT TTTAGAAATT
CCTTTTGATT ATGAAAGAAA AATGATGACA ACGGGAAATA TAATAAATGG AAGAAGAATA
TTTCTTACCA AAGGGGCAGT AGAAAAAGTT TTACCATTAT GTAAGTATGC ATTAATAAAA
GGAGAAAAAA TTATTTTAGA TGAAAGTCTA AAGCAGAAGA TTTTAAATAA AAATAATGAA
TTGATGGACA AAGGTTTGCG TGTTTTGTGT TTTGCTTTTT CTGAAACTTG GCCTGAAAAA
GATATGGTTT TTGTTGGTTT AGTAGGATTA GAAGACCCAC CAAGACCGGG AGTCAAAGAT
GCTATAAAAA CAGCCCATGA AGCAGGGATA AAAATAATCT TAATTACAGG TGATGCAAGT
AGGACAGCAT TGGCGATATC AAAAGAAATT GGGCTTGTAA AAAGAAATCC TGTCATTATT
GAAAGTGAAG AGTTTCATAA ATTAAGTGAT AATGAGCTTA AAAATAAGCT CTCTTCAAAA
GAAATTATTT TTACAAGAAT GTCTCCAGCA GATAAACTTA GAATTGTTAC TCTATTACAA
GAAATGGGAG AAAGAGTTGC TGTTACTGGA GATGGTGTAA ATGATACACC TGCTTTAAAA
AAAGCTGATA TCGGTATTGC CATGGGAAGT GGAACTGATG TTGCTAAAGA AGTTGCTGAA
ATAATTCTCC TTGATGATAA CTTTGCTACT ATAATTTCTG CAATTGAAGA AGGAAGAACT
ATTTATGAAA ACATTAAAAA ATTTATTTCT TATTTCTTTA CATCAAATGT AGCCGAATTA
ATTCCATACA TAGCATATGC TATTTTTAGA ATACCTCTTC CTTTAAAAAT CATGCAGGTT
CTTGCTATAG ACTTAGGAAC AGATATACTT CCAGGTCTTG CCCTTGGAGC TGAAAAACCA
ACCAAAGAAG TAATGAAAAA ACCACCAAGG AGTCACAAAG AAAGGCTTAT AGATTCTTTT
ATTCTTATAA GGTCTTTTTT GATTCTTGGA CCTATAGAGG CAGCAGCTGG TTTATTTGGT
TTCTTTTATG TCCTTTATTC AGGTGGATGG CATTGGAACG AACCAATTTC TTCATCAAAT
ATTTTATATA TGCAAGCAAC CACAGCTTGT TTAACTGGGA TTGTAATTAC TCAAGTGGCA
AATGGATTTG CTTCTCGGAC TTTTAAAGAG CCAGTTTTTA AAATAGGTTT ATTCTCAAAC
AAATTCTTAA TTTTTGGAAT ACTTTTTGAG ATTCTATTGC AAATTTTCAT AGTTTACCAT
CCTTTAGGAA ATAAAATATT TTCAACTTAC CCAATTCCAA TAAAAATTTG GCTGATTTTA
ATTCCTTTCG CTATTTTGTT ATTCACAATA GAAGAGTTTA GAAAAAACTT GATTATAAAG
GATAATCAAA AACTTTGA
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| Protein sequence | MKINEVSKEE VFSLLKTSEK GLTEKEAKKR LSQYGYNEIE EVKKSPIIFK FLRQFTHFFA
IILWVAAGLA FLSDLINPAE EMKSLGFAII LVIVINAVFA FIQEYKAEKS IEKLRLLVPR
RCRVIRDGIE KEISATELVP GDIIILSEGD KVPADARVIE SNSLTVNNAP LTGESIPIVL
TCKPFFGELI KSNNVAFAGS MVISGSGKAV VFATGMNTEF GKIAHLTQTV QAEETPLQKE
ITKTSKIIAL VAISIGIIFF VIGSFIGRNF TENFIFAIGV IVALVPEGML PTVTLSLAIG
SQRMLRRNAL VKTLTAVEAL GSITVICTDK TGTITQNKMA VKDVWIFDES SKDMLMKIAY
LCNNAEIVNN EYKGDPTEVA LLKYVREKYG DINAERFLEI PFDYERKMMT TGNIINGRRI
FLTKGAVEKV LPLCKYALIK GEKIILDESL KQKILNKNNE LMDKGLRVLC FAFSETWPEK
DMVFVGLVGL EDPPRPGVKD AIKTAHEAGI KIILITGDAS RTALAISKEI GLVKRNPVII
ESEEFHKLSD NELKNKLSSK EIIFTRMSPA DKLRIVTLLQ EMGERVAVTG DGVNDTPALK
KADIGIAMGS GTDVAKEVAE IILLDDNFAT IISAIEEGRT IYENIKKFIS YFFTSNVAEL
IPYIAYAIFR IPLPLKIMQV LAIDLGTDIL PGLALGAEKP TKEVMKKPPR SHKERLIDSF
ILIRSFLILG PIEAAAGLFG FFYVLYSGGW HWNEPISSSN ILYMQATTAC LTGIVITQVA
NGFASRTFKE PVFKIGLFSN KFLIFGILFE ILLQIFIVYH PLGNKIFSTY PIPIKIWLIL
IPFAILLFTI EEFRKNLIIK DNQKL
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