| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0694 |
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| Symbol | |
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| ID | 6332158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 712505 |
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| End bp | 714745 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656982 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001930884 |
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| Protein GI | 188996633 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00369778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGG CAACTATTGT TTGGACAAAG ATTGACGAAG CACCGGCTCT TGCAACTTAT
TCTTTACTAC CAATCATGAG AGCTTTTACA AAAGGTGCAG ACGTTGAAAT TGAGTTAAGA
GATATTTCTT TATCAGGAAG AGTTATAGCG TTATTCCCAG AGTATTTAAA AGAAGACCAA
AGAATTCCAG ATGAGCTTTC TTATTTAGGA GAGCTCGTTT GGAAACCAGA AGCTAACATT
ATGAAGCTTC CAAACATCTC TGCATCTGTT CCTCAGCTTA TAGCAACAAT AAAAGAATTA
CAATCTCAAG GATACAACCT TCCAGATTTT CCAGAAGACC CAAAGACAGA AGAAGAGAAG
GCAATTAGAG AAAGATATAT GAAAGCTGTT GGCTCTGTAG TAAACCCTGT TTTAAGACAA
GGAAATTCAG ACAGAAGACT TTCTAAATCT GTTAAAGAAT ATGCTAAAAA ATTCCCACAT
AAAATGAAAG CTGTTAGCCC TAACTCCAAG GCTCATGTAG CTCATATGTT AGGTGGAGAT
TTTTATGAAA ACGAAAAATC AGTTACTATC AAAAAAGATA CAACAATAAG ATATGAATTT
GTTAACAAAA ATGGAGAAGT TAAAGTATTA AAAGATGGTG TTAAGGTATC TGTTGGCGAT
GTTGTAGATG GAACATTCTT AAGCAGAAGA AAGTTAAGAG ACTTTTATGA AAAAGTAATT
GAAAGAACTA AAGAAGATGA TATTCTTTTC TCTTTACACT TAAAAGCAAC AATGATGAAA
GTTTCTGACC CTGTAATGTT TGGGGATGCT ATAAGAGTTT ATTTTAAAGA ATTATTTGAA
AAATTTGGAA AAGAGCTTGA AGAAATAGGG TTTAATCCAA ATAACGGTCT TGCAGATTTA
GAAGCTAAAT TATCTAAGTT GCCAGAAGAT AAACAAGCTG CAATCAAGAA AACAATTGAA
GAAATCTACC AAAAAAGACC AAGAATGTAT ATGGTAGATT CAGACAAAGG AATTACAAAC
TTACACAGAC CAAACGACGT AATCGTTGAC GCATCCGTTC CAGCTGTTAT TAAAAATGGT
TTACAAGGCT GGGGTCCAAA AGGTGAAGAA GATGACTGCG TAATCACAAT CCCAGATAGA
AGCTATGCAA GAATGTATAA AGAAATAGTT GAAGATATTA AAACTAACGG GCAGTTTGAC
CCTGCAACCA TTGGAAGCGT TGCAAACGTA GGTTTAATGG CAATGGGAGC TGAAGAGTAT
GGTTCTCACG ACAAAACATT CTTCCCACCA GAAGATGGAA AAATCAGAAT CGTTGACGAA
GAAGGCAATG TATTAATCGA ACATGAACTT GAAGCAGGAG ATATTTATAG AAGCTGTATC
ACAAGAGATA TAGCAATCAG AGACTGGATA AAATTAGCTG TTAACAGGGC AAAAGAAAGC
GGTGAGCCAA TAGTATTTTG GCTTGATAAA TACAGAGCTC ACGACAGAGA ACTTATAGAA
AAAGTAAGAG AGGAGCTTCC AAAATACGAT TTATCCGATG TTGAGTGGTA CATCAAATCT
CCAGAAGATG CTATGAAATT TACATTAAAA AGATTTAGAG CTGGTTTAAA TACTATTTCT
GTAACCGGTA ACGTTTTAAG AGACTACTTG ACAGACCTAT TCCCAATCAT TGAGGTAGGT
ACATCAGCAA GGTCTTTATC AATCGTTCCA TTGATTGCTG GCGGTGGTGT ATTTGAAACA
GGTGCTGGTG GCTCTGCTCC TAAGCACGTA GAACAATTCT TAAAAGAAGG ACACTTAAGA
TGGGATAGTC TTGGAGAGTT CCTCGCATTC GTTGAATCAT TAAAATTAGC TTACAAACAA
TTAAAAACAT TGCATGGAAA GGATAATCCA AGAATATTGG TTCTTGCAGA AACCTTAGAT
AAAGCAGTAC AAAAATATCT TGAAAATAAC AAAACACCGG GAAGAAAAGT TGGTCAGCTT
GATAATAGAG GTTCTCACTT CTACCTTGCT ATGTATTGGG CAGAGGCTTT AGCTACTCAG
GATAAAGACC CAGAATTGGC TAAGAAATTT GAAAAAGTAT TTGCCGACTT AAAAGAAAAT
GAGCAAAAAA TCCTTCAAGA AATAGCAGAT TCTGAAGGTA AACCACAAGA CATAGGCGGA
TACTACCATC CAGACGATGC AAAAGCTGAA AAAGCAATGA GACCAAGCGA AACATTCAAT
AGAATAATAG ATTCTATATA A
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| Protein sequence | MSKATIVWTK IDEAPALATY SLLPIMRAFT KGADVEIELR DISLSGRVIA LFPEYLKEDQ
RIPDELSYLG ELVWKPEANI MKLPNISASV PQLIATIKEL QSQGYNLPDF PEDPKTEEEK
AIRERYMKAV GSVVNPVLRQ GNSDRRLSKS VKEYAKKFPH KMKAVSPNSK AHVAHMLGGD
FYENEKSVTI KKDTTIRYEF VNKNGEVKVL KDGVKVSVGD VVDGTFLSRR KLRDFYEKVI
ERTKEDDILF SLHLKATMMK VSDPVMFGDA IRVYFKELFE KFGKELEEIG FNPNNGLADL
EAKLSKLPED KQAAIKKTIE EIYQKRPRMY MVDSDKGITN LHRPNDVIVD ASVPAVIKNG
LQGWGPKGEE DDCVITIPDR SYARMYKEIV EDIKTNGQFD PATIGSVANV GLMAMGAEEY
GSHDKTFFPP EDGKIRIVDE EGNVLIEHEL EAGDIYRSCI TRDIAIRDWI KLAVNRAKES
GEPIVFWLDK YRAHDRELIE KVREELPKYD LSDVEWYIKS PEDAMKFTLK RFRAGLNTIS
VTGNVLRDYL TDLFPIIEVG TSARSLSIVP LIAGGGVFET GAGGSAPKHV EQFLKEGHLR
WDSLGEFLAF VESLKLAYKQ LKTLHGKDNP RILVLAETLD KAVQKYLENN KTPGRKVGQL
DNRGSHFYLA MYWAEALATQ DKDPELAKKF EKVFADLKEN EQKILQEIAD SEGKPQDIGG
YYHPDDAKAE KAMRPSETFN RIIDSI
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