| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0687 |
|---|
| Symbol | |
|---|
| ID | 6331744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 705667 |
|---|
| End bp | 706680 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642656975 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001930877 |
|---|
| Protein GI | 188996626 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT ATAACGTTGC TATACTTGGA GCCACAGGAG CTGTTGGTCA AACAATGATA
AAGGTTTTGG AAGAAAGAAA TTTTCCGGTA AATGAAATAA AATTCCTTGC ATCTGAAAGG
TCTGCCGGTA AAGAAGTTGA ATATTATGGA ATGAAGTATA AAGTTGAGGC TGTTTGTGAA
GAGGCTTTTG AGAATGTAGA CATCGCATTA TTTTCTGCCG GTGGTGAAAG AAGTAAAAAA
TGGGTACCCA TCGCAGCAAG TAAAGGAGCT GTTGTTATAG ATAATAGCTC TGCTTTTAGA
ATGGACCCGG AGGTTCCATT GGTTGTTCCG GAAGTTAATC CGGAGGATGT AAAATGGCAT
AAAGGAATTA TTGCAAATCC TAACTGTTCT ACAATACAAA TGGTTGTTGC GCTATATCCA
ATTCATAAAG TAAAGAAAAT AAAAAGAATC ATTGTAGCAA CATACCAGGC AGTTTCTGGA
GCAGGAGCAA CTGCAATAGA GGATTTAGAG CTTGAAACAA AAGCAGTTAT GGAAGGAAAA
TACTTTTATC CAAGGGCATT ACCACATCAC ATAGCATTTA ACGTTATACC GAGAATTGAT
AACTTTGAAC CAAACGGCTA CACAAAAGAA GAGTTAAAAA TGATCAATGA AACAAGAAAG
ATTATGCATG AACCGGATAT TAAAGTATCT CCAACTTGCG TTAGAGTGCC TGTATACGTA
GGACATAGTG AAGCTGTAAC AATCGAGACT CAAGAGCCTA TCACTGCTGA AGAGGCAAGA
GAGATATTAA AAAATGCACC GGGAGTTGTT GTAGAAGATG ACCCATTTAA CAATGTTTAT
CCAACTCCGA TAGAGGTAGC AGGTAAAGAT GATGTATTTG TAGGAAGAAT AAGAAAAGAC
CTTGGATTTG AAAATGGTTT ATCTATGTGG ATAGTTGGAG ATAACTTAAG AAAAGGTGCA
GCAACTAACG CAGTTCAAAT AGCAGAATTA TTGGTAAAAT ATGAACTACT CTAA
|
|---|
| Protein sequence | MKSYNVAILG ATGAVGQTMI KVLEERNFPV NEIKFLASER SAGKEVEYYG MKYKVEAVCE
EAFENVDIAL FSAGGERSKK WVPIAASKGA VVIDNSSAFR MDPEVPLVVP EVNPEDVKWH
KGIIANPNCS TIQMVVALYP IHKVKKIKRI IVATYQAVSG AGATAIEDLE LETKAVMEGK
YFYPRALPHH IAFNVIPRID NFEPNGYTKE ELKMINETRK IMHEPDIKVS PTCVRVPVYV
GHSEAVTIET QEPITAEEAR EILKNAPGVV VEDDPFNNVY PTPIEVAGKD DVFVGRIRKD
LGFENGLSMW IVGDNLRKGA ATNAVQIAEL LVKYELL
|
|---|
| |