Gene SYO3AOP1_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0686 
Symbol 
ID6331965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp704854 
End bp705474 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content29% 
IMG OID642656974 
ProductHhH-GPD family protein 
Protein accessionYP_001930876 
Protein GI188996625 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAA AAGATGTGTA TAATAAGCTT TTTGAGAAGT ACGGATATCA AAATTGGTGG 
CCTGTTCATG AAGGACAAAA TAGCATTGTA GAAATAACCT TTGGAGCTGT TTTGACGCAA 
AACACTTCTT GGAAAAATGT TGAAAAGGCT ATAGAAAATC TAATAAAACA TAACATGCTG 
AATTTTGAAA AAGTCTACTG CTCAGATATA GAATTTTTAA AAGAACTAAT AAGACCGGCC 
GGATTCTATA ATCAAAAAGC AAAAACATTA AAATCTGTAT CAAAACTATT TTTAGAAAAA 
CCTCACAAAG ACATTACTAG AGAAGATTTA TTAAGCATTA AAGGAGTAGG AAAAGAAACG 
GCTGATTCAA TACTACTTTA TGCACTCAAC AAACCATACT TTGTGATAGA TGCTTACACA 
AAAAGATTTT TAAAAAGACT TAGCTTAGTG AGTGATAAAA TAGATTATGA TAGTTTGCAA 
AGTTTTATAA CACAAAATAT AGAAATGGAC TTAGAGATTT ACAAAGAATT TCATGCTCTA 
ATAGTAAAAC ATTGCAAAGA ATTATGCACT AAAAAGCCGA AATGTGAAGT TTGTTTTTTC 
AAATGCGAAA GGTTATCTTA A
 
Protein sequence
MTLKDVYNKL FEKYGYQNWW PVHEGQNSIV EITFGAVLTQ NTSWKNVEKA IENLIKHNML 
NFEKVYCSDI EFLKELIRPA GFYNQKAKTL KSVSKLFLEK PHKDITREDL LSIKGVGKET 
ADSILLYALN KPYFVIDAYT KRFLKRLSLV SDKIDYDSLQ SFITQNIEMD LEIYKEFHAL 
IVKHCKELCT KKPKCEVCFF KCERLS