Gene SYO3AOP1_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0672 
Symbol 
ID6331455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp690513 
End bp691022 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content28% 
IMG OID642656957 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_001930862 
Protein GI188996611 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAG AAACTCTAAA AGAGATAAGA ATCACAGGCT TAAAGGTAAA TTATTACTAC 
ATATGCAAAA GAAAATTATG GCTTTTTTCT AAAAATCTTA ACTTTGAGAA AAACAATGAT
AAAATCATTC TTGGTCAAAT ACTTCATGAA AATTATTATA AATCAGAAAA AGAGAGGGAT
ATTTTAATTC AAGAGTTAAT ATCGATTGAT ATCGTTGATG ATGATTACAT AAGAGAGGTT
AAATCTTCTG ATAAAATGGA AAAAGCAGAT ACAATGCAGG TTGTATACTA TCTGTACGTT
TTAAAACAGC TCGGAATTGA AAAAGTTGGA CTTATAAACT ATCCAAAGCA GAAAAAGAAG
AAAGAAGTTT ATCTAACAAA ACAGTTGGAG CAAGAGCTTT TAGAATCTTT AAAAGATATA
GAAAAAATCA TCAATCAGCC TAATCCACCA AAATTAGAAA AACTTCCTTA CTGCAAAAAA
TGTTCATACT TTGAATTTTG CTTTGCATGA
 
Protein sequence
MDLETLKEIR ITGLKVNYYY ICKRKLWLFS KNLNFEKNND KIILGQILHE NYYKSEKERD 
ILIQELISID IVDDDYIREV KSSDKMEKAD TMQVVYYLYV LKQLGIEKVG LINYPKQKKK
KEVYLTKQLE QELLESLKDI EKIINQPNPP KLEKLPYCKK CSYFEFCFA