Gene SYO3AOP1_0670 details

Gene Information

• Locus tag: SYO3AOP1_0670
• ID: 6331453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 687629
• End bp: 688321
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642656955
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_001930860
• Protein GI: 188996609
• TIGRFAM ID: [TIGR01895] CRISPR-associated protein Cas5, Tneap subtype; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATTT TAAGAGTAAG GCTATATCAA GAGTTTGCAT GTTATAGAAA ACCAATAACG 
TATGGATTTT GGGAGACCTA TCCTCTCCCG CCGCTATCAA CTGTAAAAGG ATTTTTTCAT 
AATGTAGTAG AGGCAAAAGA GTATATGCCC GCAAGATACG GCATTCAAGG AAAGTTTAAA 
TCTGTTGTTC TTGACATGCA AAGTATGTAC AAATTTGGTA GAAAAGACTC AGAAAACAAA 
GGAATTATCA TAGAAGGTTT TAACAAGCCA CTTTTAAAAT CTCCAATATA CGTATCTAAT 
CTTTACGCAG TTGAGCTTAC AATCTATATA GAGTCTAAAT TAGAGTATTT AGAAAAGTTT 
AGAGAGAATC TTTTAAATCT TGAGTATCCA TCACTTGGAA GAAAAGAAGA CCTTGTAAGG 
GTTGACTCGG CAGATATAGT AGAGCTTATA GAAAGGGATT TGTTTGAAGA CAGCTATCCA 
TTAGAAAACG GAATCTATTT TTCAAAAGAA AAAGCAAAAG AGCTTGAAGT AAATGGAATA 
AACTACAGAA TGAATTTTTA CTACGAAAGT AAAAACGGCA TAAGATTTTT TAAGAAAAAG 
GACGTTGTGT ATGTTGATAA TAAAAATTTA GAAATTGGAA GCATTCTATA TGATAAAGAA 
GAGGATAAAG TTGTTGATTT AATCGGAGAT TAA 

 

Protein sequence

MSILRVRLYQ EFACYRKPIT YGFWETYPLP PLSTVKGFFH NVVEAKEYMP ARYGIQGKFK 
SVVLDMQSMY KFGRKDSENK GIIIEGFNKP LLKSPIYVSN LYAVELTIYI ESKLEYLEKF 
RENLLNLEYP SLGRKEDLVR VDSADIVELI ERDLFEDSYP LENGIYFSKE KAKELEVNGI 
NYRMNFYYES KNGIRFFKKK DVVYVDNKNL EIGSILYDKE EDKVVDLIGD