| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0668 |
|---|
| Symbol | |
|---|
| ID | 6332583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 685074 |
|---|
| End bp | 686693 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642656953 |
|---|
| Product | CRISPR-associated CXXC_CXXC protein Cst1 |
|---|
| Protein accession | YP_001930858 |
|---|
| Protein GI | 188996607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01908] CRISPR-associated CXXC_CXXC protein Cst1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCT TTAATAGAAA AGATTCTCAC GTTTCACCTC TCACCTCTCA CGTCTCACGT
ATATACCTTG GCGATTGGCT TTACAATGCA GGTATCGTAG GATTTCTAAG AATTAATAAC
CATCTTTGGG ATGTAAAAGA TAAAAAATTA ATTTCAAAAG ACGAAAATCT TTTAAAAATT
GGAGATAACT ATATAGAGAT TGACAGAAAA ATTTTTGATG GCTTTACCGA TAGGTTTTTT
GATTATGCTT TTAATCTCTA TGGCAGGTAC GATAGAAAAT TAAAAAGATT TAGAGAATTG
CTTGAAAATC TAAATGATGG AACATTTAAA GATGTCTATA AAGACTTCAA AGAAGAAGTC
AACGGTTTTA CACTTTTAAA AAATAAACTT GGAGATATAA AAGCTAAAAA CTCTCAAGAA
CTTAAACATC TGATTGAAAA AGCAATAAGA ATTTTGGAGC AGGACAAGGA GGAGTTTGTA
GAAAGCGACG TTCAGATATT TTTAAGGAGT TTTAACGGTC AAAAAAGCTT TTTAAATAAA
ACTATAACAA AAGATAGAAA AAAGAAATTT TATGAAGACT TTGAAGAGCC TTTAAAAACG
GATAACAATC AAAAAGATAA AAAATTCACT TGCGTAATCT GTGGAGAAAG ACCGGCAAAA
AAAGACACAA ATTATGATAC AGGATTTTCG CCGATATTTG GATTAAATAA AGACGCAGTT
AACTTTGCTT GGAATTTCAA TACAAAACTG CCATCCTGTG ATATCTGTGA AATTGTTTAC
TTTTGCTATT TTGCAGGACT TACAGAGTTA AATGGAAAAT ATTACTTTGT AAATTTAGAT
GATTCTGTTG AATCTTTGAT GCTTGCAAAC AACTTGTTTA AAGAAGAGAT AGAAAAATCT
CCTGAAAATC CATTTGTAGA CTTCTTTACC GAGTACTTAT TAAGAATAAA AAAATCGCAA
GCTAAATACA CCTTGTCAAA TATAAACTTC TTAGAAACAG AATTAAAGGA AACACTTCCA
AAAGTTTTTA GCTTTAACAT CGATTATAAA ACTGCTGAAT TTATAGAAGA AAATCATGAA
AATCTTAAGT TATTGTCAAA ATCATTTTTT ATACTACCAG ATAAAAATAA AACAAGAGTC
TATATTCTCA CCGAGTTTTT AAACTTGATT TTGAAGAAAG ATTTAAACTA TGGGCTTTTA
TATAAAATCT TTAAAAGTGC TACACAAGAT AAAGCTTATG TCAGTAATTA TAATTTACAA
AGGTTAATAA TTATGTATCT TCTTTATAAA CAAAAAGTTG GAGGTAAAGA GATGGGCTTA
GAAGAAAAAA GTTTATGGGC TATGTACATG CAAGGGAAAA ATCTTCTTGA AAGGCTAAAA
GATGGAGATG CAGAAAACAA AATCCAATCT ATAGCATATA AGCTTTTAAA TGCTTTAAAG
ATTGGAGATG TAAACCAGTT TATGGATGTG ATGATGAGAG TTCACATGGC TTATGATTTG
GAAGTTCCAA GTTTGTTAAT AAAGGCACTG CAGGATAAAG ATAACTTTTA TCTCCTTGGA
TACAGCTTTT TAAATGGACT ACTTGGAAAA GAAAATAAAT TACAGGAGGA AAACCAATGA
|
|---|
| Protein sequence | MELFNRKDSH VSPLTSHVSR IYLGDWLYNA GIVGFLRINN HLWDVKDKKL ISKDENLLKI
GDNYIEIDRK IFDGFTDRFF DYAFNLYGRY DRKLKRFREL LENLNDGTFK DVYKDFKEEV
NGFTLLKNKL GDIKAKNSQE LKHLIEKAIR ILEQDKEEFV ESDVQIFLRS FNGQKSFLNK
TITKDRKKKF YEDFEEPLKT DNNQKDKKFT CVICGERPAK KDTNYDTGFS PIFGLNKDAV
NFAWNFNTKL PSCDICEIVY FCYFAGLTEL NGKYYFVNLD DSVESLMLAN NLFKEEIEKS
PENPFVDFFT EYLLRIKKSQ AKYTLSNINF LETELKETLP KVFSFNIDYK TAEFIEENHE
NLKLLSKSFF ILPDKNKTRV YILTEFLNLI LKKDLNYGLL YKIFKSATQD KAYVSNYNLQ
RLIIMYLLYK QKVGGKEMGL EEKSLWAMYM QGKNLLERLK DGDAENKIQS IAYKLLNALK
IGDVNQFMDV MMRVHMAYDL EVPSLLIKAL QDKDNFYLLG YSFLNGLLGK ENKLQEENQ
|
|---|
| |