| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0632 |
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| Symbol | |
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| ID | 6331797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 648798 |
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| End bp | 652295 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656918 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001930823 |
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| Protein GI | 188996572 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAG ATTTTGTTCA TTTACATTTA CACTCTCATT ACTCACTACT TGATGGAATG
ATAAAACCAA AAGAGCTTGC AAAAAAAGCA GTTGAATATG GATATAAAGC AGTTGGTCTT
ACTGACCATG GAAATATATT TGGGGCTGTC GAGTTTTATG AAGAAATGAG AAAAGTTGGC
GTTAAACCGC TTATAGGTAT GGAAAGCTAT TTTACTAACA ACAGGTTTGA GAAAAAAGGT
GAAGGCTCAG ACGATATTCT TACAGATAAA AACTATCATT TAATTCTTTT TGCCAAAGAT
AAAACAGGAT TTAAAAATCT AATGAAACTA TCTTCCATAG CATACACTGA AGGATTTTAT
TATAAACCAA GGATAGATTG GGAACTTCTT GAAAAGTATC ATGAAGGACT TATCTGTCAA
ACAGCCTGTT TAAAAGGATT TGTTCCAAAT CTGCTTGCAC AAGGTAAATA CGAAGAAGCT
AAAAAATATG CAAAGAGATT AAAAGATATC TTTGGAGAGG ATTTATATTT TGAAATTCAG
GTAAATGGTT TAGAAGAGCA AAATATAGCT AACGAAGGAA TAATAAGGCT TGCAAAAGAG
CTTGGCGTTA AGGTTGTGGG AACCAACGAT TCTCACTATC TTAACCCAGA AGACCATACA
GCTCACGATG TAGTAAAAGC ATTACAGATG AAGAAAACAC TAAAAGAATT ATACTCAGAA
GGCAAGGCTT TTAGAGTTAA AGGTCTTCAT TTTACAAGAC CGGAAGAGAT GTATGAGAAA
TTCAAAGGTT ATGAAGAGTA TTTAAAAAAT ACAATGGAAA TTGCAGAGAA ATGTAATTTA
GAGATAGATA CAGCTGAAAC AAGAGGATAC TTATTCCCTA AGTTTGAAAC CCCTGAAGGA
ATGACTCCTG CCCAGTATTT TGAAAAACTT GCAAGAGAAG GATTAGAAAA ACGCTTAGAA
AGCATAAAGG ATCTAACGCC TGAAAAACTC AAAGAATACA GAGAAAGATT GGATTATGAG
ATAAATGTTA TAAACCAAAT GGGTTTTGCA GAATACTTTT TGATAGTTCA AGATTTTATT
AACTATGCAA AGAAAAACGG AATACCGGTA GGACCTGGCA GAGGTTCAGC CGGTGGTTCA
TTGGTTGCAT ACTGTCTAAG AATAACAGAA GTAGACCCTC TTAAGCATGG ACTACTTTTT
GAAAGATTTT TAAATCCTGA TAGAATCTCA ATGCCGGATA TAGACGTAGA CTTTTGCATG
GAAAGAAGAG AGAAAGTTAT TGATTATGTT AAACAAAAGT ACGGAGAAGA TAGCGTAGCC
CAAATTATCA CGTTTAACTT TATGAAATCT AAAATGGTTA TAAGAGATGT TGCAAGAACT
CTTGGATTTC CTTATCAAGA AGCAGATAAA ATCGCAAAAA TGATACTACC CGGACCAATT
CAAGGTTCTA CGCTAACAAT AGATGAAAAC TTGGAAGCCC ATCCTGACTT TAAAAAACTG
TATGAAACTG ATGAGAAGGT AAGGGAGCTT TTAGACCTTG CTAGAAAGTT AGAAGGTTCA
GCAAGACACA CAGGAATCCA TGCAGCCGGT ATTGTTATAG CTCCCGGAAC ATTGGATGAA
TACGTGCCTG TATACAGAGA TAAAGACGGA AACAGGGCAA CCCAGTTTGA GATGAAAACC
TTAGAACAGC TTGGACTTGT AAAAATGGAC TTTTTAGGTC TAAAAACTCT AACAGAACTT
GATTATATGA AAAAATTAAT CAAAGAAAGA CACGGGATAG ATGTTGATTA TAACAGCTTA
CCTTTTGATG ATGAAAATGT TTTTAAACTT TTACAGTCAG GAAGAACTAC CGGCGTATTC
CAATTAGAAA GTAAAGGTAT GCAGGACCTG TTAGTAAGAT TAAAGCCATC AAACTTGGAT
GAGATTATAG CTATTCTTGC ACTATTTAGA CCTGGGCCGC TTATGAGTGG AATGGTGGAC
GAATACATAG AAAGAAAGCA CGGCAGAAAG CCTATAGAAT ACCCATTTGA AGAAGTAAAG
GATATACTAA AAGAAACATA CGGATTAATA GTATACCAAG AGCAAATAAT GTTTATGTCA
AACATACTTT CAGGGTTTAC CATGGCAGAA GCTGATACAT TAAGAAAAGC TATAGGCAAG
AAAAACCCTG AAGTTATGGC AAAAATGAAA GATAGATTTA TTGGTGGAGC GGTAGAAAGA
GGATTCAGTA AAGAAAAAGT AGAAAAACTC TGGGACGATA TAGAAAAGTT TGCTTCTTAC
TCGTTCAACA AATCTCACTC GACAGCTTAT GCATATCTAA CATATTGGAC AGCATGGGTA
AAAACATACT ATCCTGAAGA ATTTTTCGCA GTAAAATTAT CAACTGAAAA CAACGACAGT
AAATTCTTAA ACCTGCTTCT TGATATGGAA AACTTTAACA TAAAACTTCT TCCTCCGGAT
GTAAACAAAA GCATGCCTGA GTTTGCCATA GAAGAAAAAT CCAAAATTAG ATTTGGATTA
TCAAGAATCA AGGGTATTGG AGAAGAGGTC GCAAAATCCA TAGTAGAAGA AAGAAAAAAT
GGTCCATTTG TAGATATTTT TGATTTCTGC GAAAGATTTG ATACAAAAGT AGCAAACAAA
AAAGTTTTAG AATCTTTAAT AAAGGCTGGA GCTTTTGATT TTGAAGGAAT TGATAGAGGT
ATCTTGCTTG AAAACGTAGA AAAAGCAATC ACAACAGGAC AAAAAGCAAG AGATAGCAAA
TCAGCAGGGC AGAACTCACT TTTTGCACTT ACAACAACTC CGGTTGTAAA CGTAAAACAC
ATATACGAGG ATGGAACCAA ATTAACAGAA AAAGAAAAAC TAAGATTAGA AAAAGAAGTT
CTTGGATTTT ACCTTTCCGG ACATCCATTG AATGCTTATA AAAATGAGCT AAAGAATAAA
GTATTAAAAA TTAGCGAGAT TATGGAGTCT GCTTTTGGCG ATAAAACTTT CCAGTCAGGT
TCAAAAGTTA AAATTGCGGG TGTCATAGAT GAGATTAAAT ACAAAAAAAC AAAATCCGGA
GCAACAATGA TAGTGTTTCA GATTTCTGAC GAAACCGGAC AGATGGATGT AAGAGCATTT
CCAGAAAAAC TTGAAAACAA AGAATTGTTT CAAGATGACA ATATAGTCAT TTTGGAAGGT
GTTTTAGAAG TAGATGAAGA ACAGGAGAAA GTATCAATGA CGGCGAATAA TGTTGAATCG
ATAGATAGCT TAACAAGAGA GATTAAAGGT ATTAAAATAA AACTTTCAAG AGAAAAAGCA
GCCAATGGTG TATTAGAAAA AATAAAGAAC GTTCTAACTA AAAACAAAGG AGATAAAGAA
GTTGTAGTTG TTCTTTATAA TGGCAAAAAA CCATACTGTG AAATTGCTTT ACATTCTGAT
TTTCATGTAA ATTATGATGA AAATTTTAAA TATGAAATAC TTAATCATCT TTCTGAGAAG
GAGATAGAGG TGTATTGA
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| Protein sequence | MAQDFVHLHL HSHYSLLDGM IKPKELAKKA VEYGYKAVGL TDHGNIFGAV EFYEEMRKVG
VKPLIGMESY FTNNRFEKKG EGSDDILTDK NYHLILFAKD KTGFKNLMKL SSIAYTEGFY
YKPRIDWELL EKYHEGLICQ TACLKGFVPN LLAQGKYEEA KKYAKRLKDI FGEDLYFEIQ
VNGLEEQNIA NEGIIRLAKE LGVKVVGTND SHYLNPEDHT AHDVVKALQM KKTLKELYSE
GKAFRVKGLH FTRPEEMYEK FKGYEEYLKN TMEIAEKCNL EIDTAETRGY LFPKFETPEG
MTPAQYFEKL AREGLEKRLE SIKDLTPEKL KEYRERLDYE INVINQMGFA EYFLIVQDFI
NYAKKNGIPV GPGRGSAGGS LVAYCLRITE VDPLKHGLLF ERFLNPDRIS MPDIDVDFCM
ERREKVIDYV KQKYGEDSVA QIITFNFMKS KMVIRDVART LGFPYQEADK IAKMILPGPI
QGSTLTIDEN LEAHPDFKKL YETDEKVREL LDLARKLEGS ARHTGIHAAG IVIAPGTLDE
YVPVYRDKDG NRATQFEMKT LEQLGLVKMD FLGLKTLTEL DYMKKLIKER HGIDVDYNSL
PFDDENVFKL LQSGRTTGVF QLESKGMQDL LVRLKPSNLD EIIAILALFR PGPLMSGMVD
EYIERKHGRK PIEYPFEEVK DILKETYGLI VYQEQIMFMS NILSGFTMAE ADTLRKAIGK
KNPEVMAKMK DRFIGGAVER GFSKEKVEKL WDDIEKFASY SFNKSHSTAY AYLTYWTAWV
KTYYPEEFFA VKLSTENNDS KFLNLLLDME NFNIKLLPPD VNKSMPEFAI EEKSKIRFGL
SRIKGIGEEV AKSIVEERKN GPFVDIFDFC ERFDTKVANK KVLESLIKAG AFDFEGIDRG
ILLENVEKAI TTGQKARDSK SAGQNSLFAL TTTPVVNVKH IYEDGTKLTE KEKLRLEKEV
LGFYLSGHPL NAYKNELKNK VLKISEIMES AFGDKTFQSG SKVKIAGVID EIKYKKTKSG
ATMIVFQISD ETGQMDVRAF PEKLENKELF QDDNIVILEG VLEVDEEQEK VSMTANNVES
IDSLTREIKG IKIKLSREKA ANGVLEKIKN VLTKNKGDKE VVVVLYNGKK PYCEIALHSD
FHVNYDENFK YEILNHLSEK EIEVY
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