Gene SYO3AOP1_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0627 
Symbol 
ID6331681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp643889 
End bp644581 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content35% 
IMG OID642656913 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001930818 
Protein GI188996567 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATTA AAAAAGTAGG AGCAAAACCA CAAACCCTTG TAGAAAAAAT ATTTTTCTTA 
GATTTTATAA AAGGATTAAA AACTACAATA AAGCATCTTT GGAAAAAGGT AATAACTGTT
GACTTTCCTT ACGAAGTGGT TACTCCACCA CCAAGATTTA GAGGAATTCA CGGACTTAGA
ACAGTAGATG GAACGGAAAA TCCTGAATTT GATAGTTGGG TGAAAAGATT GAAGATTAAG
CCGCCAGAAC CTGGAGAAAC AAGATGTATT GCTTGTAAGT TTTGTCAGGC AGCTTGTCCA
GTACCGGAGC TTTTTGATAT CCAATCAGAA AAGCTTGATG TTCCAGAAGA CCATCCACAT
TATGGATTAA AAGTAATGAC AGTTTTTAAC ATGGATTTAT CTAAATGTAC ATTTTGCGGT
TTATGTACCC AAGCATGCCC GACCGATTGT ATCATCATGA CAGATATATA CGACCTTTCA
TCTTACACAA GAAAAAGCTG GGTTTTAGAT AAAGATAAGC TTACTCAAAT AGCAAATGAT
TTTGTTGCAA GAAGAGGAAA AGAAAAGTTT AATGAAAAAT CAGAATGGAG AAAAGACCAA
AAGTTATGGC CAGAATACGA TAAAACAAGA GAAAAACTTT GGGACTTTAA CATGCCAAGA
CTTGGTCCTA ACTACCAAGA TCAAACAGCT TAA
 
Protein sequence
MGIKKVGAKP QTLVEKIFFL DFIKGLKTTI KHLWKKVITV DFPYEVVTPP PRFRGIHGLR 
TVDGTENPEF DSWVKRLKIK PPEPGETRCI ACKFCQAACP VPELFDIQSE KLDVPEDHPH
YGLKVMTVFN MDLSKCTFCG LCTQACPTDC IIMTDIYDLS SYTRKSWVLD KDKLTQIAND
FVARRGKEKF NEKSEWRKDQ KLWPEYDKTR EKLWDFNMPR LGPNYQDQTA