| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0624 |
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| Symbol | |
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| ID | 6332438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 640958 |
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| End bp | 641956 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656910 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001930815 |
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| Protein GI | 188996564 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000517637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAGT ATAAAAGACC AACTGTTTCC ATAGTGGGAG CGGGGAATGT TGGGGAGCAT
GTAGCAAATT TGATAGCAAT CAAAGAATTA GCAAATATAA AACTTTTTGA CCTGCCCAAA
AAAACAGAAG ATAAAACTTT TGAAGTTGTA AAAGGAAAAG CTCTTGATAT TAAACAAATG
GCTGCAGCTC TTGGGGTTGA TGTTGATATA AAAGGGTACA ATGTCACTCC GGATGGTCAA
GGTTATGAAC CAATGAAAGA TTCAGATATA GTTGTAATAA CAGCCGGATT TCCAAGAAGA
CCGGGAATGA GCAGAGATGA TTTACTTACA GCAAACGTTA ACATCATAAG AACAGTAGCA
GAAAGAATAG CATTGTATGC ACCAAACGCC GTTGTTATAG TGGTTTCTAA TCCGGTTGAC
GTTTTAACCT ATACAACGTT AAAAATCACA GGTTTTAACA AGCATAGAGT TTTAGGAATG
GCCGGAGTTC TTGACACGGC AAGATTTAAA ACTTTCATAT CTCAAGAACT TAAGGTCTCT
GTATCAAATA TAAACTGCTT TGTCCTTGGT AGTCATGGAG ATGATATGGT TCCTTTAATT
TCTGTTTCAA ACGTTGGAGG AATTCCTCTT AAGAAATTAT TTACAGAAGA AAAGCTGAAA
GAGCTTATAG ATAGAACAAA ATACGGGGGA GGGGAGATTG TTAACTTAAT GGGAACCTCT
GCCTACCATG CACCCGGAGC TTCTGTCGTT GAAATGGTAG AAGCAATCTT AAAAGATAAA
AAAGAGATTA TGCCATGTTC TATTTATTTA GAAGGAGAGG ATGCAAGATT CTATGAAGCT
TACGATATTT GTATTGGTTT ACCGGTTAAA GTTGGTGCCC ATGGATGGGA GGAAGTACTA
AAAGTAGAGT TAAGCCAAGA AGAAAAAGCA ATGTGGGAAT CTTCAGTTAA ATCTGTAAAA
TCAGGAATTG AGAGAATAAA AGAGTTAAAA TTAATATAA
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| Protein sequence | MGEYKRPTVS IVGAGNVGEH VANLIAIKEL ANIKLFDLPK KTEDKTFEVV KGKALDIKQM
AAALGVDVDI KGYNVTPDGQ GYEPMKDSDI VVITAGFPRR PGMSRDDLLT ANVNIIRTVA
ERIALYAPNA VVIVVSNPVD VLTYTTLKIT GFNKHRVLGM AGVLDTARFK TFISQELKVS
VSNINCFVLG SHGDDMVPLI SVSNVGGIPL KKLFTEEKLK ELIDRTKYGG GEIVNLMGTS
AYHAPGASVV EMVEAILKDK KEIMPCSIYL EGEDARFYEA YDICIGLPVK VGAHGWEEVL
KVELSQEEKA MWESSVKSVK SGIERIKELK LI
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