| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0612 |
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| Symbol | |
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| ID | 6331638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 627465 |
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| End bp | 628499 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656898 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_001930803 |
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| Protein GI | 188996552 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00246607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA AAGTAACCAT TCAAGTATTA GCAGATTTAG CTCAAGAAAG AGAGGAAAAA
TATCATTCTC ATAATCCATT GGCTCCTGGT CATAGAATGT GTATCGGCTG TGGTATTCCA
CCAATTGTTA ACGAAGTGTT ATTAGCTATT GATAAGCCAG TAGTAGTATC AACTGCAACA
GGTTGCCTTG AAGTTACAAC AGGAGTATAT CCATATACAG CATGGAATAC GCCATGGATT
CATGTTAACT TTCAGTCTGC GGCGGCTGTA ATTGGCGGTG TAGAAGCTGC TTATAAAGTT
CTTAAAAAGA AAGGTTTGAT TGATGAAGAT ATAGAGTTTG TTGCATTTGG TGGTGATGGT
GGAACTTACG ATATTGGATT CCAATCATTA TCTGCAGCAG CAGAAAGAGG TCATAACTTC
CTTTACGTTT GCTATAACAA CGAAGGGTAT CAAAACACAG GATACCAAAA ATCTTCTGCA
ACGCCTATTG GTGCATATAC TAAAACAACT CCGGTTGGTT CTGCTAAAGT AGGAAAGCAA
GAGCCAAGAA AAGACTTGAC TATGATTATG GCTGCACATG GTATACCTTA TGTAGCTCAA
GCATCTCCTC ATATCTATAG AGATTTAACA AGAAAAGTTA AAAAAGCTTT AACTTTTAAA
GGTCCAAAAT TTATTAACAC ACTTCAACCT TGTACTCTTT CTTGGAGATT TGCTCCAGAA
GATACAATGA GACTCGCAAA GCTTGCTGTT GAAACAAGAT ACTGGCCAGT GTATGAAGTA
ATCAATGGTA AATACTGGAA AGTCAACATT AAACCAAAAA GACCAAAACC AATTGAAGAG
TATATCTCAG CTCAGCCAAG ATGGAAACAC GTATTAAAAT ATCCAGAAAT CGTTGAAAGA
ATTCAAAAAG AAATAGATGA TAAATGGAAC CATCTATTAG CTTTAGAAGA AATGTCTAAA
GCACTTGCTG AGAAAGAAGG AATAGATTAC GAAGCACTTT TCGCAAATCC TGAAGACAAT
AAAGAAGGTC AATAA
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| Protein sequence | MAKKVTIQVL ADLAQEREEK YHSHNPLAPG HRMCIGCGIP PIVNEVLLAI DKPVVVSTAT
GCLEVTTGVY PYTAWNTPWI HVNFQSAAAV IGGVEAAYKV LKKKGLIDED IEFVAFGGDG
GTYDIGFQSL SAAAERGHNF LYVCYNNEGY QNTGYQKSSA TPIGAYTKTT PVGSAKVGKQ
EPRKDLTMIM AAHGIPYVAQ ASPHIYRDLT RKVKKALTFK GPKFINTLQP CTLSWRFAPE
DTMRLAKLAV ETRYWPVYEV INGKYWKVNI KPKRPKPIEE YISAQPRWKH VLKYPEIVER
IQKEIDDKWN HLLALEEMSK ALAEKEGIDY EALFANPEDN KEGQ
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