| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0609 |
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| Symbol | |
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| ID | 6332169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 624683 |
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| End bp | 626110 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642656895 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001930800 |
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| Protein GI | 188996549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.155198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATATA TAATCTTTCT TTTATTATTG ATTTTTAGTT TTTCTGCATA TTCTTCAGAA
ATTTTAAAGT ATCAATTTGA GTCTATAATT AGGGATATAA ACAATGAAAA TGATGCAAAG
GTTGGAATAT TTATAAAATC TCTTTCTGAG GATGATTTTA CATATATGTA CAATTATAGA
AATCCATTTA TTCCTGCTTC TAATCAAAAA CTTATAACAA CTATCTCTGC AATAGCAAAT
TTATCCCCAG ATTTTAAGTA CAGAACAACC CTTGCCACAA ATGGTAATGT TAAAAATGGA
ACATTGTATG GAAATTTATA TCTAATTGGT GGCGGAGACC CATCGCTAAC AGTCCAGGAT
TTAGAAAATA TGGTTAAAAA ACTGAAAGAG TATGGAATAA ATAGAGTTGA AGGAAATCTT
ATAGGTGATA ATTCATATTT TTCTGAAGAA GGTACAGGTC AAGGGTGGCC TGAAGATGAT
TTAAACTACT GTTTTACAGC AAGATTTAGC GGACTTTCAG TAAATGAAAA CTGTTTAAGA
ATTTCGGTTA ATATAAAAAA CGGTAAAGTT TATGTTTCTA TGAATCCTTT AAATAACTAT
TATCAAATCG TAAATAATAT AGAGTTTTCA AAAAAAGCTG GAAATGTAAT TTTAAGAGTT
GAAGGTAATA GATTAATTTT AGAAGGTAAA GTTTCTTCAA AAAGGAGTTT AAATTTAGAA
TTTTCTATTC CGGTTAATCA TCCATCAATA TTTACTCTAT CAGTTCTATC AAAAATTTTA
GATGAAAATG GAATTAAAGT TTCAGGAAAA ATGTATTTAG GAAAGGCTGC ATCATACAAA
TATTTTGTTA TTCACCAGTC AAAACCGTTA AGAGAGTTAA TCAAAAAAGC AAACAAGGAC
AGTAATAATT TTTATGCAGA GCAAATTTTT AGAACGATAG GTAAGGAAGT TTATGGAGTA
GGAAGTACAT ACGCATCAGC AAGAGCAATC ATAGATACAT TAAGAAAAAT GCATGTAGCA
ACTGAAAATA TACGAATTTA CGATGGAAGT GGACTATCAA AATATAACTA CACTACTCCA
GAAGCTTTAG TTAAAGTTTT AGACTATATA TACAAAACTC CTTATTTCTA TGATTTTTTT
GAATCTTTAG CAATCTCTGG AGTAGATGGA ACTTTAAAAC ACAGATTAAA TGACCAATCT
TTGAAAGGAA GAATAATAGC CAAAACGGGT TATATTAAAA AAGTTAAGAA TCTATCTGGT
TATGTAAAGG CTTCCAACGG CGAAGTATTT GTTTTCTCTA TCTTAGTTAA TGATTTAAAA
ACTACGGAGA TAGCTAATAA ACTTCAGGAA AAAATTTGTA GCATCCTTGC TCAATATCCA
CATATGGTTG GAATTGGTAA GTTGAATACA AATAACAAAA TTAGATAG
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| Protein sequence | MRYIIFLLLL IFSFSAYSSE ILKYQFESII RDINNENDAK VGIFIKSLSE DDFTYMYNYR
NPFIPASNQK LITTISAIAN LSPDFKYRTT LATNGNVKNG TLYGNLYLIG GGDPSLTVQD
LENMVKKLKE YGINRVEGNL IGDNSYFSEE GTGQGWPEDD LNYCFTARFS GLSVNENCLR
ISVNIKNGKV YVSMNPLNNY YQIVNNIEFS KKAGNVILRV EGNRLILEGK VSSKRSLNLE
FSIPVNHPSI FTLSVLSKIL DENGIKVSGK MYLGKAASYK YFVIHQSKPL RELIKKANKD
SNNFYAEQIF RTIGKEVYGV GSTYASARAI IDTLRKMHVA TENIRIYDGS GLSKYNYTTP
EALVKVLDYI YKTPYFYDFF ESLAISGVDG TLKHRLNDQS LKGRIIAKTG YIKKVKNLSG
YVKASNGEVF VFSILVNDLK TTEIANKLQE KICSILAQYP HMVGIGKLNT NNKIR
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