Gene SYO3AOP1_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0602 
Symbol 
ID6331792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp618864 
End bp619442 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content32% 
IMG OID642656889 
Productisochorismatase hydrolase 
Protein accessionYP_001930794 
Protein GI188996543 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAA AGCTTACAGA TAGAGACGCT TTAGTTGTAG TTGATATGCA AAATGATTTT 
ATGCCGTATG GAGTTTTGCC TGTAAAAGAT GCTGACAAAA TCGTTCCAAC GATAAACAAA
TACATAGAAA AATTTGAAAA TAAAGGACTT CCTGTTTTCT TTACAAGAGA TTGGCATCCG
GAAAATCATA TATCTTTTAA AGGATTTGGC GGAATATGGC CTCCTCATTG CGTTCAAAAT
ACAGAAGGTG CAAAGTTTCA TCCAGACTTA AAAATTCCAT TAGACAACAA ATTTATCATT
TCAAAAGGTT TTTTACAAGA TTTTGATGCT TACTCAGGTT TTCAAAATAC AGTTTTAGAT
AGCTTATTAA AAGAAAGAGG AATAAAAAGA ATATTTGTTT GTGGTGTGGC AACAGATTTT
TGTGTAAAAA ACACAGCTAT TGGCGGTGTA AATCTTGGAT ATCAAGTATT TTTACTAACT
GATGCGATTA AGCCGGTTTT TGAAGATAAA GAGAAAGAAG TGATAGACAG TCTTTTAGAA
AAAACAGTTG TAGCAGTAGA GCTTGAAGAT TTAGAATGA
 
Protein sequence
MRVKLTDRDA LVVVDMQNDF MPYGVLPVKD ADKIVPTINK YIEKFENKGL PVFFTRDWHP 
ENHISFKGFG GIWPPHCVQN TEGAKFHPDL KIPLDNKFII SKGFLQDFDA YSGFQNTVLD
SLLKERGIKR IFVCGVATDF CVKNTAIGGV NLGYQVFLLT DAIKPVFEDK EKEVIDSLLE
KTVVAVELED LE