| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0594 |
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| Symbol | |
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| ID | 6331163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 611123 |
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| End bp | 612193 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656881 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001930786 |
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| Protein GI | 188996535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 79 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTACAG ACTCAGAAAA ACAAAAACTT ATTGACTATA CAGTAAAGCT TGTTAACATT
CCGTCTGTTA TAGGCAATGA AAAAGAAATA GCAGACTTTG TAGAAGATTT TTTGAAAAAT
TACAATCTAA ACATCATCAG ACACAACAAT TCTATAATAG CTTACGATAA TTTAGAACCA
TCAAAAAAGA CGATCGGATT TATCGGTCAT CTTGACACAG TACCTGGAAC AAATGATTTT
ACAGGTCAAA TAATAGAAGA TAAAATATAC GGACTTGGTG CAAGTGATAT GAAAGGTGGT
CTTGCTGTTA TGATGGCTTT GATAGACCAT TTTTCTGATA AAGAAAAATC ATACAATGCT
ATCTATGTGT TCTATGAAAA AGAAGAAGGT CCTTATGTAG ATAATGGATT AGAGCCATTA
TTATCACAAT ATAATATCAT TCAAAAATCA GATTTAGCTT TTGCCTTAGA GCCAACTAAT
AACGTCGTGC AGGTTGGATG TCTTGGAACG ATGCATGCAT CGGTAATTTT TGAAGGAAAA
AGAGCACATT CAGCAAGACC ATGGCAGGGA GAGAATGCAA TCCATAAATC TGTAAACTTT
CTAAAAAGAC TTTCTGAGTT TGGAATAAAA GAATATGATT TTCACGGAAT TAAATACTAC
GAAGTTATGA ACGCTACAAT GGTTAGCTTT TCCGGCGGAA GGAATATAAT TCCGGATAAA
TTTGAGATAA ATGTAAATTA CAGATTTGCA CCGGGTAAGT CAATAGAGCA GGCGAAAGAA
GAGCTTTTAA ATCTTGTAAA CAACGAAGCG AAGGTAGAGT TTACAGACGT TGCACCATCC
GGCAATGTTT GTCTTGATAA TCCAATCTTA AAAGATTTTA TATCTAAGTA TAATCTGCCA
ATAGAAGCAA AGCAGGCTTG GACAGATGTT GCAAGGCTAT CCTTATACGG AATTGATGCT
GTAAACTTTG GACCCGGAGA CCCGGCTCAA GCACATCAAA AAAATGAATA CATTCCTATA
AAAAACTTAT TTGATAGTTA TGAAATTTTC AAAGATTTTC TAAGTCGTTA A
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| Protein sequence | MITDSEKQKL IDYTVKLVNI PSVIGNEKEI ADFVEDFLKN YNLNIIRHNN SIIAYDNLEP
SKKTIGFIGH LDTVPGTNDF TGQIIEDKIY GLGASDMKGG LAVMMALIDH FSDKEKSYNA
IYVFYEKEEG PYVDNGLEPL LSQYNIIQKS DLAFALEPTN NVVQVGCLGT MHASVIFEGK
RAHSARPWQG ENAIHKSVNF LKRLSEFGIK EYDFHGIKYY EVMNATMVSF SGGRNIIPDK
FEINVNYRFA PGKSIEQAKE ELLNLVNNEA KVEFTDVAPS GNVCLDNPIL KDFISKYNLP
IEAKQAWTDV ARLSLYGIDA VNFGPGDPAQ AHQKNEYIPI KNLFDSYEIF KDFLSR
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