Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0591 |
Symbol | |
ID | 6331518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 608333 |
End bp | 609649 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656878 |
Product | MATE efflux family protein |
Protein accession | YP_001930783 |
Protein GI | 188996532 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATC AAGACACAAA AAAGATTTTA TCTTTGGCAG TTCCTGCTGC TTTAAGTAAT TTTTTAGATA TCGTTCAAGT GCTTATAGAT ATGATCATGC TTGGAAGGGT TTCTCCTTCT GCCATCGCGT CAGCCGGCAT ATCTATGCAG TTTTTAGGGC TTTTGTATGC AATGATGGCT ACTTTTTCAG TAGGTACTTC TGTTGTAATT TCGCGATACA TCGGAGCAAA GCAGTACTCA CAGTCAAACA AAACTGCCTT TTCTATCTCT GTTTTTTCTT TACTGCTATC TATTCCATTT ACAATCTTAG GCTTTTTCTT TTCTAAGTAT ATTTTTATGT TTATGGCAGG TTCTGATGAA GTAATCAGAC TTGGTCAAGA GTATTTTTCT ATATTGGCTT TAACCTTTCC GGTTTTATTC ATGGAGATGG CTATATACTC TGCATTTAAT GCAGCAGGAG ACACAAAAAC GCCTTTAAAG ATAGTAATCG TTGCAAACAT TATAAACACG GTGCTTGCTT ATGGACTGAT ATTTGGGAAT TTTGGATTTC CAAGGCTTGA AGTCAAAGGT GCTGCCATTG CCACAGCCAT AAGCTATTAC ATAAGCTTTT TTATGTATCT GTATGTGATA AACTCAAAAC ATTCAAAAAT TAGATTTGAA TTTGATTTTT TGCTTGAAGA AGTTAAGAAG ATTTTTAAAA TTGGCGTTCC AAGTGGTTTT GAAAGGACTT TAACATACTT TTCTTTTTTG CTTTTTGTAA AGATAATAGC AGATTATGGA ATTTATACAC TTGCAGGTTA TCAGGTAGGT CTGAGGATAG AAGGGCTTGC GTTCATGCCG GGTTTTGGTT TTACAATCGC AGCAATGACC CTTGTAGGTC AAAGTCTTGG ATCTAACAAT CCACAGCAGG CAGAAGCATA TGCAAAAGAG ATAATAAAGA TTGCTTCTAT TTTCATGGGT CTTATGGGTG TTGTGATGGT AATCTTTCCT GAGTATTTAG CTATGGTGTT TACAAATGAT AAAAAAACAA TAGAAGAGGC TTCTTTATAT TTAAGGATAG TAGGACTAAC TCAAATTCCT TTAGCGATAG GGTTTGTTTT AAGCGGTGTT TTAAGAGGTG CAGGAGCTAC GAAAACAACA TTATACATAA ATACATTTTC TTTATGGGTT TTAAGAATCA TTCCGGCTTA CATACTTTCA AAAATTTTTG GAAATATTTT ATTTGTGTAT TTAGCAATGT TTTTAGAAAC ATACTTAAAA GCAGCTATAC TTTGGTATTT CTTTAAAAAA GGCGATTGGA AAAAGATTAA AGTTTAG
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Protein sequence | MLNQDTKKIL SLAVPAALSN FLDIVQVLID MIMLGRVSPS AIASAGISMQ FLGLLYAMMA TFSVGTSVVI SRYIGAKQYS QSNKTAFSIS VFSLLLSIPF TILGFFFSKY IFMFMAGSDE VIRLGQEYFS ILALTFPVLF MEMAIYSAFN AAGDTKTPLK IVIVANIINT VLAYGLIFGN FGFPRLEVKG AAIATAISYY ISFFMYLYVI NSKHSKIRFE FDFLLEEVKK IFKIGVPSGF ERTLTYFSFL LFVKIIADYG IYTLAGYQVG LRIEGLAFMP GFGFTIAAMT LVGQSLGSNN PQQAEAYAKE IIKIASIFMG LMGVVMVIFP EYLAMVFTND KKTIEEASLY LRIVGLTQIP LAIGFVLSGV LRGAGATKTT LYINTFSLWV LRIIPAYILS KIFGNILFVY LAMFLETYLK AAILWYFFKK GDWKKIKV
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