Gene SYO3AOP1_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0581 
Symbol 
ID6331577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp595699 
End bp596973 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content34% 
IMG OID642656868 
Productpeptidase M48 Ste24p 
Protein accessionYP_001930773 
Protein GI188996522 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0013814 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGG TTTTTAAATC CTTATTGATA ATTTTCTTCT TTGTAATTTC TTGTGCCCAA 
GTTCAAGATC CATTAACAGG AAAGCCGACT CTAACACTTT TGCCAGAAAG CGAAGAAATA
GCAATCGGTA AAAAGGTTGT TCCACAAGCC ATAAATGAAA ACGACGGATT GTATCCGGAT
AGAGAAGTTC AAGAATATGT TAAAAGCATT GGTTATAAAT TAGCATCAGT AACACCCAGA
AAAGTAGATT ATCAGTTTTA TGTAGTAAAT TCAGGGGAAG TAAACGCCTT TGCACTTCCA
GGTGGTCCTG TATTTATCCA TCGAGGATTA TTACTCACTC TTGATAACGA ATCAGAACTT
GCCGGAGTAA TAGCACACGA GCTTGGACAC ATCAACGCAA GACACCATGC AAAATTTTTA
GAAAAGACTT ATGGATTAAA CATACTTCTA AATATATTAG CTGTAGCAAC CTCTCAATCT
CAGTATCAAC AAATCGTTAT GCAACTTGCA CAGGTATCGG CAGGTCTTTT GCAATTAAAG
TATAGCAGAG ACCAAGAAAG AGAAGCAGAT GCTTTAGGTG TTAGGTTTAC TTACGAAACA
GGCTACGACC CAAGAGGTTT AATCGCAACT TTTGAAAAAT TTAAAAAAAT GGAAAAAACT
CAAGCCCCTC CATGGCTTTT AACTCACCCA TTACCGGAAG AAAGAATACA AAATGTTTCT
CAGCTAATAG CTACAAAATA TCCAGATAAA TTACTTCTCA AAAAAGACAG TGAAAAATTT
CAAGAGATCA AAAAACGCCT TATCTTAACT TCAGACAGCT ATAAATACGT AGAGAACGCA
AAGGATAACA TAAAAAATAA AAATTTAGCT GTCTCATTAA CAAATTTAGA CAAAGCTATA
AAAGCATATC CAGAAAACAA TGCAGCATAT ACTTACAGAG CCTATGTTTA TTATCAGCTT
AAAGACTTCA AAAAATCTTA TGAAGATGCT TTAAAAGCAT ATAACATTGA TAGAATGTAT
TTTATGCCAC AGCTTATAAT GGGTGCTTCT TTAACAAAGC TTGGAAACTA TCAAGAAAGT
ATAAGAGTTT TAGAAAATGC TAAAAATTTA ATAGATTCTA ATCCAGACCT TTACTACTTC
CTTGGTGTAA GCTATCAAAG TATTGGAGAC AGACAAAACG CATATAACAA CCTTACTACA
GCTTTAAAAC TTACCGATGG CAGAAGAGGA TGGGAACAAG ACGCACAAAA TAGATTAAGA
ATGTTGGTAA GGTAG
 
Protein sequence
MRKVFKSLLI IFFFVISCAQ VQDPLTGKPT LTLLPESEEI AIGKKVVPQA INENDGLYPD 
REVQEYVKSI GYKLASVTPR KVDYQFYVVN SGEVNAFALP GGPVFIHRGL LLTLDNESEL
AGVIAHELGH INARHHAKFL EKTYGLNILL NILAVATSQS QYQQIVMQLA QVSAGLLQLK
YSRDQEREAD ALGVRFTYET GYDPRGLIAT FEKFKKMEKT QAPPWLLTHP LPEERIQNVS
QLIATKYPDK LLLKKDSEKF QEIKKRLILT SDSYKYVENA KDNIKNKNLA VSLTNLDKAI
KAYPENNAAY TYRAYVYYQL KDFKKSYEDA LKAYNIDRMY FMPQLIMGAS LTKLGNYQES
IRVLENAKNL IDSNPDLYYF LGVSYQSIGD RQNAYNNLTT ALKLTDGRRG WEQDAQNRLR
MLVR