Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0570 |
Symbol | infB |
ID | 6332400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 585031 |
End bp | 587817 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656857 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001930762 |
Protein GI | 188996511 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTTAA AGGATTTAGC ATTAGAGTTA GGCATAGACC CTAAAAAATT AAAAGAGGAG TTAAATGAAG AGCTTGGATT AGGGCTTAAA AAGATTACAG ATAAATTACC TGATGAAGTA GTGGATTTAA TCAAAGATAG ATATAAAAAA TCACAAGAAG TAAAAGAAGT CCAAGTAGAA GAAAAAGGAA TTAAAGCTTT TGACCTTTAT CACAGCTTAG GAATAACTCT TTCTGAATTA GAAGAAAAAT TAAAAGAAGT GGGATTTTCA AAAGAGATCA CAAACTGGAC AATCATTGAT GAAGAAACTG TTGAAAAAGT TAAAAAAGCC ATAGAAGATG AAAAGAAAAG AAGAGAAGAA GAGTTAAGGA AATTAGAAGA AGAGAGAAAA AGAAGAGAAG AGGAAGAAAA AGCTAAAAAA GAAGAAGAGT TAAAAGCAAA AGAAAAAATA AAAGAAATTC CTGAAGAGAA AAAAGAAGAA GAAATTAAGC CAGAGCCAAA AAAAGAAGAA ATTCCTGAAG TAATAGAAGG TGTAGTTGCA GAAGAAGAAA GAAAGCCTTT CAGAAAAGAA AAAAGAGAAT TTGAAAAGAA AGAAGAAAGA AAGCCTTACG AGAAAAAACC TTTCGAAAAG AAGCCATACG AAAAAAGAGA AGGATATGAA AAAAGAGAAA AATACGAGAA AAAGGGAAAA TTTGAAAAAA GAGAGGAAAC AAGACCTCCT AAGGAAGGTT TTGCTGAAAA AGAAAAATAC AAAGAAGAAA GAAAGCCATT TGAGAAAAAA GAGAGATTTG AAAAAAGAGA AGAAAAACAA CCAACCCCTA TTGCTATCGT TCCAGAGTCT ATAAAAGAAG AGAAAAGGGT TGAGAAAAAA GAAACAAAAG AGGAAAGAGA AACAAGATTA GCAAAAGAAC AAAAAGAAGA AATGGAAGCC CTCAGAAAGT TAATGGAAGG CCAACCTAAA AAGAGAAAGC CTAAGAAAGA AGAGAAGAAA AAAGAAGTAG AAGAGCAATC AAAAGAAGAA GAAATTAAAA TCGTCCAAAT CCCTGAAGTA ATAACAGTTA GAGAGTTAGC AGATTTATTA GATATTCCTG TAAATCAAAT ATTGATGGAT TTATTAAAAA GAAAAATACT TGCAACAGTA AACCAAACAA TAGACCCTAA GATAGCTATA GAAATAGCAG AAGAACACGG ATTTTTAGCT GAACTGAAAG AAGAAGGTGT AGAGGAAGAA AAAGAAGCAG AGGAAGAAAT CCTTTCTGAA GAAGAAACAG CTGAAGAAGA AGGAAATCTT GTCCCAAGAC CGCCTGTTGT GGTAGTAATG GGGCACGTAG ACCACGGAAA AACTACGTTG CTTGACACTA TTAGAAAAAC AGATGTTGCA GCAAAAGAGC ATGGTGGTAT CACTCAGCAT ATAGGTGCTT ATAAAATAAA ACTTCCAAAC GGAAAAGAAA TAACATTCTT GGATACACCC GGACACGAGG CATTTACAAC TTTAAGAGCA AGAGGGTCAA AAGTTGCAGA TATAGCTATC TTAGTAGTTG CTGCAGATGA CGGAGTAAAG CCTCAAACTG TAGAAGCTAT TAACCACGCA AAAAGTGCAA AAGTTCCTAT TGTTGTAGCT GTTAACAAGA TAGATAAACC TGGTGCAGAC CCTATGAGAG TAAGACAAGA GCTTACCCAG TATGGACTTA TCCCAGAAGA ATGGGGTGGA GATACGATCT TTGTAGATGT ATCTGCAAAA ACAGGAAAGA ATGTAGAAGA GCTTTTAGAA ATGGTCTTAC TCGTTGCTGA AATGTTAGAA CTCAAAGCAA ACCCTAATAG GCAAGCAGTA GGAACAGTTA TTGAATCTAA ATTAGACCCT AAGAAAGGAC CTGTAGCTAC TGTTTTAGTT GAGAATGGTA CTTTAAAAGT TGGAGATTAC TTTGTAGCTG GTTATACTTG GGGTAAGGTT AAGGCTCTTT TGAACGAGAG AGGAGAAAGG CTTAAAGAAG CAGGACCTGG AACTCCCGTA GAGGTGCTTG GATTTGAAGA AGTTCCTCAA GCGGGAGATA AATTTATTGT AAAAGCATCA GAAAGAGAGG CTAAACAGTT AGCTGAAATT AGAAAATTAA GAAGAGAAGA AGAGCTTCTT GCTAAAAAGA CAAGAATACA TTTAGAAAAT CTTAGCGAAG TTAAAGAAAT TAATATCATT ATTAAAGCTG ATACACAAGG TTCTTTAGAG GCTCTCAGAA AGTCCATAGA AGAGCTTTCA AATAAATTTA GTGAAGTAAG TATTAATATA ATACACGGTG CTGTTGGTGG AATTACAGAA AGTGATGTTA TGCTTGCAGC GGCATCTAAC GCAATAATTA TAGGGTTCAA CGTTAGACCA GATGCTGGAG CAAGAAAAGC TGCAGAAGAA GAGAACGTAG ATATAAGAGT TTATAACATT ATCTATCAAG CATTGGAAGA TTTAGAAAAA GCAATGAAGG GTATGCTTGC TCCTACTTAT AGAGAAGTAT TGCTCGGGAC TGCGGAAGTG AGAGCAACGT TTAAAGCAAA ATCTATTGGT ACAATAGCAG GATGTTATAT TACAGATGGC ATAATTAAAA GAAATGCAAA AGCCAGATTG GTAAGGAATG GTGTTGTAAT ATACGATGGA GAGATAAGCT CTTTAAAAAG ATTTAAAGAA GATGTTAAAG AAGTTCAGAA AGGCTTTGAA TGTGGACTTA CTTTAAAGAA TTTTAATGAC ATAAAAGTAG GAGACATAAT AGAAGCTTAT GAAATTGTTG AAGAAAGACC TCAATAA
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Protein sequence | MKLKDLALEL GIDPKKLKEE LNEELGLGLK KITDKLPDEV VDLIKDRYKK SQEVKEVQVE EKGIKAFDLY HSLGITLSEL EEKLKEVGFS KEITNWTIID EETVEKVKKA IEDEKKRREE ELRKLEEERK RREEEEKAKK EEELKAKEKI KEIPEEKKEE EIKPEPKKEE IPEVIEGVVA EEERKPFRKE KREFEKKEER KPYEKKPFEK KPYEKREGYE KREKYEKKGK FEKREETRPP KEGFAEKEKY KEERKPFEKK ERFEKREEKQ PTPIAIVPES IKEEKRVEKK ETKEERETRL AKEQKEEMEA LRKLMEGQPK KRKPKKEEKK KEVEEQSKEE EIKIVQIPEV ITVRELADLL DIPVNQILMD LLKRKILATV NQTIDPKIAI EIAEEHGFLA ELKEEGVEEE KEAEEEILSE EETAEEEGNL VPRPPVVVVM GHVDHGKTTL LDTIRKTDVA AKEHGGITQH IGAYKIKLPN GKEITFLDTP GHEAFTTLRA RGSKVADIAI LVVAADDGVK PQTVEAINHA KSAKVPIVVA VNKIDKPGAD PMRVRQELTQ YGLIPEEWGG DTIFVDVSAK TGKNVEELLE MVLLVAEMLE LKANPNRQAV GTVIESKLDP KKGPVATVLV ENGTLKVGDY FVAGYTWGKV KALLNERGER LKEAGPGTPV EVLGFEEVPQ AGDKFIVKAS EREAKQLAEI RKLRREEELL AKKTRIHLEN LSEVKEINII IKADTQGSLE ALRKSIEELS NKFSEVSINI IHGAVGGITE SDVMLAAASN AIIIGFNVRP DAGARKAAEE ENVDIRVYNI IYQALEDLEK AMKGMLAPTY REVLLGTAEV RATFKAKSIG TIAGCYITDG IIKRNAKARL VRNGVVIYDG EISSLKRFKE DVKEVQKGFE CGLTLKNFND IKVGDIIEAY EIVEERPQ
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