| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0556 |
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| Symbol | |
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| ID | 6332380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 572359 |
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| End bp | 573834 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656845 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001930750 |
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| Protein GI | 188996499 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 100 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTATG AAGATTTAAG GGAGTTTATA TCAGACCTTG AAAAAAACGG AGAGTTAGTC
AGAGTAAAAA GTAAAGTTAG TCCGATTCTT GAAATAACCG AGCTTGCAGA TAGAATGTCA
AAGCTTCCAA AAGGTGGAAA GGCTTTACTT TTTGAAAACG TTGAAGGATA CGAAAACATC
CCGGTTTTAA TCAATGCCTT TGGAAGTGAA AAGCGTATGA AAATGGCACT GGGCGTTGAA
AGTTTTGAAA GCATCGGCTG GAAATTATAT AAAATCTTAA AACCAGAAAT TCCTAATACA
TTTTTAGACA AGATAAAAAA GCTACCAGAA TTGAAAAGAT TAAACGACGC TTTACCTGTT
GTTGTCAAAG ATGGAAAATG TAAAGAAGTA ATCAAAAAAG GTCAAGATGT AAACATCTTT
GATTTTCCGG TTTTAAAATG TTGGCCAAAA GACGGTGGAA GGTTCATAAC ACTTCCGATA
GTCATTTCAA AAGACCCGGA AAACGGAATA AGAAATGTAG GAATGTACAG AATACAGCTT
ATAGATAGAG ACAAAGTAAC AGTTCATTGG CAGATTCATA AAGGCGGTTC TCATCATTTT
TGGAAGGCTA AAAAACTTGG TGTTAAAATC CCTGTTGCTA TAGTGGTAGG TGCAGACCCT
GTTCTTACTT ACTGTGCATC CGCTCCACTA CCTGAAGATG TAGACGAATT TTTATTCGCC
GGTATTATTA GAGACAAAGG TGTTAAGCTT GTAAAATGTG AAACGGTTGA TTTAGAAGTT
CCGGCAGATG CAGAAATTGT GATAGAAGGA TACATAGACC CAAGCGAGCC ATTAGTTGAT
GAAGGACCAT TTGGAGACCA TACAGGATTT TACACTCCTG TTGATAAATA TCCATTAATG
CATATAATAT GTATAACTCA TAGGAAAAAT CCTATCTATC ATACAACGGT GGTAGGAAAG
CCGCCAATGG AAGATGGTTG GCTTGGAAAA GCAACAGAAA GAATATTTTT ACCACTTGTT
CAGTTTAATT TACCAGAAAT TGTAGATTAC AATTTGCCAA TCTCTGGATG TTTTCATAAC
TTTGCTTTTG TATCTATAAA AAAACGTTAT CCCGGACATG CATTTAAAGT TATTAACGCA
CTTTGGGGGC TTGGTCAGTT AATGTTTGAA AAGCATATAA TAGTTTTTGA TGAATGGGTA
AATATTCATG ATATTGATGA AGTTTTATGG ATTTGGGGTA ATAATGTAGA CCCTTCAAGA
GATGTAATTA TTCAAAAAGG TGTAATAGAT GTTCTTGACC ATTCTACAAA CCTGCCGGGC
TTTGGTGGAA AAATGGGAAT AGATGCAACT ACTAAATGGA AAGAAGAAGG CTATACAAGA
GATTGGCCAG AGGTTGCAAA AATGGATGAA GAAGTAAAGA AAAAGGTTTT GCCTGTTTGG
TACGAGATAC TGCAAAAGAT GAAAGGTGAA AGGTGA
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| Protein sequence | MPYEDLREFI SDLEKNGELV RVKSKVSPIL EITELADRMS KLPKGGKALL FENVEGYENI
PVLINAFGSE KRMKMALGVE SFESIGWKLY KILKPEIPNT FLDKIKKLPE LKRLNDALPV
VVKDGKCKEV IKKGQDVNIF DFPVLKCWPK DGGRFITLPI VISKDPENGI RNVGMYRIQL
IDRDKVTVHW QIHKGGSHHF WKAKKLGVKI PVAIVVGADP VLTYCASAPL PEDVDEFLFA
GIIRDKGVKL VKCETVDLEV PADAEIVIEG YIDPSEPLVD EGPFGDHTGF YTPVDKYPLM
HIICITHRKN PIYHTTVVGK PPMEDGWLGK ATERIFLPLV QFNLPEIVDY NLPISGCFHN
FAFVSIKKRY PGHAFKVINA LWGLGQLMFE KHIIVFDEWV NIHDIDEVLW IWGNNVDPSR
DVIIQKGVID VLDHSTNLPG FGGKMGIDAT TKWKEEGYTR DWPEVAKMDE EVKKKVLPVW
YEILQKMKGE R
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